RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 ATP2B4P23634 1241 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 NF2P35240 595 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 PTPN12Q05209 780 aaKnown RBP14.65□□□□□ -0.06
SF3B2-208ENST00000529994 WDR43Q15061 677 aaKnown RBP eCLIP14.65□□□□□ -0.06
SF3B2-208ENST00000529994 PODNQ7Z5L7 613 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 MBIPQ9NS73 344 aa14.65□□□□□ -0.06
SF3B2-208ENST00000529994 DACT2Q5SW24 774 aa14.64□□□□□ -0.07
SF3B2-208ENST00000529994 OGFOD1Q8N543 542 aa14.64□□□□□ -0.07
SF3B2-208ENST00000529994 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
SF3B2-208ENST00000529994 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
SF3B2-208ENST00000529994 CWC25Q9NXE8 425 aaPredicted RBP14.64□□□□□ -0.07
SF3B2-208ENST00000529994 FZD1Q9UP38 647 aa14.64□□□□□ -0.07
SF3B2-208ENST00000529994 SREBF2Q12772 1141 aa14.63□□□□□ -0.07
SF3B2-208ENST00000529994 PRKRIP1Q9H875 184 aaPredicted RBP14.63□□□□□ -0.07
SF3B2-208ENST00000529994 MYH3P11055 1940 aa14.62□□□□□ -0.07
SF3B2-208ENST00000529994 MKI67P46013 3256 aaKnown RBP14.62□□□□□ -0.07
SF3B2-208ENST00000529994 ARMC9Q7Z3E5 817 aa14.62□□□□□ -0.07
SF3B2-208ENST00000529994 TXNRD3Q86VQ6 643 aa14.62□□□□□ -0.07
SF3B2-208ENST00000529994 MINPP1Q9UNW1 487 aa14.62□□□□□ -0.07
SF3B2-208ENST00000529994 MED23Q9ULK4 1368 aa14.61□□□□□ -0.07
SF3B2-208ENST00000529994 CCT4P50991 539 aaKnown RBP14.61□□□□□ -0.07
SF3B2-208ENST00000529994 CTSWP56202 376 aa14.61□□□□□ -0.07
SF3B2-208ENST00000529994 NOM1Q5C9Z4 860 aaKnown RBP14.61□□□□□ -0.07
SF3B2-208ENST00000529994 SPRYD7Q5W111 196 aa14.61□□□□□ -0.07
SF3B2-208ENST00000529994 CDC5LQ99459 802 aaKnown RBP14.61□□□□□ -0.07
SF3B2-208ENST00000529994 METTL22Q9BUU2 404 aaPredicted RBP14.61□□□□□ -0.07
SF3B2-208ENST00000529994 GREM2Q9H772 168 aa14.61□□□□□ -0.07
SF3B2-208ENST00000529994 ANGEL1Q9UNK9 670 aaKnown RBP14.61□□□□□ -0.07
SF3B2-208ENST00000529994 HTTP42858 3142 aa14.61□□□□□ -0.07
SF3B2-208ENST00000529994 CENPFP49454 3210 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 KIAA0100Q14667 2235 aaKnown RBP14.6□□□□□ -0.07
SF3B2-208ENST00000529994 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 STRIP1Q5VSL9 837 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 KIAA0825Q8IV33 1275 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 TRIM17Q9Y577 477 aa14.6□□□□□ -0.07
SF3B2-208ENST00000529994 KLRK1P26718 216 aa14.59□□□□□ -0.07
SF3B2-208ENST00000529994 LDLRAD1Q5T700 205 aa14.59□□□□□ -0.07
SF3B2-208ENST00000529994 TTLL11Q8NHH1 800 aa14.59□□□□□ -0.07
SF3B2-208ENST00000529994 GCC1Q96CN9 775 aa14.59□□□□□ -0.07
SF3B2-208ENST00000529994 COA1Q9GZY4 146 aa14.59□□□□□ -0.07
SF3B2-208ENST00000529994 BSDC1Q9NW68 430 aaPredicted RBP14.59□□□□□ -0.07
SF3B2-208ENST00000529994 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
SF3B2-208ENST00000529994 ZNF853P0CG23 659 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 HABP4Q5JVS0 413 aaKnown RBP14.58□□□□□ -0.08
SF3B2-208ENST00000529994 TTLL5Q6EMB2 1281 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 OTOP1Q7RTM1 612 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 APOBEC3FQ8IUX4 373 aaKnown RBP14.58□□□□□ -0.08
SF3B2-208ENST00000529994 C8orf58Q8NAV2 365 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 SLC10A4Q96EP9 437 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 CLMNQ96JQ2 1002 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 CFHR5Q9BXR6 569 aa14.58□□□□□ -0.08
SF3B2-208ENST00000529994 ZNF316A6NFI3 1004 aaPredicted RBP14.57□□□□□ -0.08
SF3B2-208ENST00000529994 DDX58O95786 925 aaKnown RBP14.57□□□□□ -0.08
SF3B2-208ENST00000529994 IGKV5-2P06315 115 aa14.57□□□□□ -0.08
SF3B2-208ENST00000529994 GTF2IP78347 998 aa14.57□□□□□ -0.08
SF3B2-208ENST00000529994 IFNL1Q8IU54 200 aa14.57□□□□□ -0.08
SF3B2-208ENST00000529994 PI4KAP2A4QPH2 592 aa14.56□□□□□ -0.08
SF3B2-208ENST00000529994 MANSC4A6NHS7 340 aaPredicted RBP14.56□□□□□ -0.08
SF3B2-208ENST00000529994 IGF2BP3O00425 579 aaKnown RBP eCLIP14.56□□□□□ -0.08
SF3B2-208ENST00000529994 ALDH1A1P00352 501 aa14.56□□□□□ -0.08
SF3B2-208ENST00000529994 CWF19L2Q2TBE0 894 aaKnown RBP14.56□□□□□ -0.08
SF3B2-208ENST00000529994 PI4KAP1Q8N8J0 262 aa14.56□□□□□ -0.08
SF3B2-208ENST00000529994 DEFB129Q9H1M3 183 aa14.56□□□□□ -0.08
SF3B2-208ENST00000529994 PCDHAC2Q9Y5I4 1007 aa14.56□□□□□ -0.08
SF3B2-208ENST00000529994 IGHMBP2P38935 993 aaKnown RBP14.55□□□□□ -0.08
SF3B2-208ENST00000529994 CD99L2Q8TCZ2 262 aa14.55□□□□□ -0.08
SF3B2-208ENST00000529994 ZBED3Q96IU2 234 aaPredicted RBP14.55□□□□□ -0.08
SF3B2-208ENST00000529994 IFT57Q9NWB7 429 aa14.55□□□□□ -0.08
SF3B2-208ENST00000529994 LEMD3Q9Y2U8 911 aa14.55□□□□□ -0.08
SF3B2-208ENST00000529994 ZNF804BA4D1E1 1349 aa14.55□□□□□ -0.08
SF3B2-208ENST00000529994 BRCA2P51587 3418 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 F8W031 263 aaPredicted RBP14.54□□□□□ -0.08
SF3B2-208ENST00000529994 APAF1O14727 1248 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 GNAI1P63096 354 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 DLGAP5Q15398 846 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 CCDC30Q5VVM6 783 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 KSR2Q6VAB6 950 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 UBE3BQ7Z3V4 1068 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 TSPYL6Q8N831 410 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 WNK4Q96J92 1243 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 SSC5DA1L4H1 1573 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 ECM29Q5VYK3 1845 aa14.54□□□□□ -0.08
SF3B2-208ENST00000529994 CLRN2A0PK11 232 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 SNAP23O00161 211 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 EN2P19622 333 aaPredicted RBP14.53□□□□□ -0.08
SF3B2-208ENST00000529994 ITGA6P23229 1130 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 KCNJ4P48050 445 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 INHBEP58166 350 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 NEXNQ0ZGT2 675 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 INTS3Q68E01 1043 aaKnown RBP14.53□□□□□ -0.08
SF3B2-208ENST00000529994 PTPN22Q9Y2R2 807 aa14.53□□□□□ -0.08
SF3B2-208ENST00000529994 RBBP6Q7Z6E9 1792 aaKnown RBP14.52□□□□□ -0.08
SF3B2-208ENST00000529994 NEURL1BA8MQ27 555 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 PPP1R12BO60237 982 aaPredicted RBP14.52□□□□□ -0.09
SF3B2-208ENST00000529994 ZBTB48P10074 688 aaPredicted RBP14.52□□□□□ -0.09
SF3B2-208ENST00000529994 GJA5P36382 358 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 MMP14P50281 582 aa14.52□□□□□ -0.09
SF3B2-208ENST00000529994 CRHR2Q13324 411 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 1732.3 ms