RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 PPP1R12CQ9BZL4 782 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 IQCGQ9H095 443 aaKnown RBP8.67□□□□□ -1.02
CTNND1-223ENST00000529986 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 ARHGEF12Q9NZN5 1544 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 SPTLC2O15270 562 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 STAT6P42226 847 aa8.67□□□□□ -1.02
CTNND1-223ENST00000529986 UBLCP1Q8WVY7 318 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-223ENST00000529986 RLBP1P12271 317 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 CERS3Q8IU89 383 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 NAP1L3Q99457 506 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 BCL2L12Q9HB09 334 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 HMG20BQ9P0W2 317 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 SAMD15Q9P1V8 674 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 OAS2P29728 719 aaKnown RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 VAV2P52735 878 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 ZC3H6P61129 1189 aaKnown RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 BAG1Q99933 345 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 PTPRCP08575 1304 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 VIMP08670 466 aaKnown RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 RNASE9P60153 205 aaKnown RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 GABPB1Q06547 395 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 IFIT5Q13325 482 aaKnown RBP8.66□□□□□ -1.02
CTNND1-223ENST00000529986 SYCP3Q8IZU3 236 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 PRAG1Q86YV5 1406 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 SAMD9Q5K651 1589 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 A0A1B0GVL5 298 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 TUBB4AP04350 444 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 FBLN1P23142 703 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 KRT83P78385 493 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 CETN1Q12798 172 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 SMC6Q96SB8 1091 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 COMMD10Q9Y6G5 202 aa8.66□□□□□ -1.02
CTNND1-223ENST00000529986 PI4KAP2A4QPH2 592 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 PCK1P35558 622 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 WAPLQ7Z5K2 1190 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 PI4KAP1Q8N8J0 262 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 RNF41Q9H4P4 317 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-223ENST00000529986 RMND1Q9NWS8 449 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 ANKRD18BA2A2Z9 1011 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 CCDC63Q8NA47 563 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 RASAL2Q9UJF2 1139 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 BUB1BO60566 1050 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-223ENST00000529986 WDHD1O75717 1129 aaPredicted RBP8.65□□□□□ -1.02
CTNND1-223ENST00000529986 FAM173BQ6P4H8 233 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 MFSD6Q6ZSS7 791 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.02
CTNND1-223ENST00000529986 SEC62Q99442 399 aaKnown RBP8.65□□□□□ -1.02
CTNND1-223ENST00000529986 C14orf93Q9H972 538 aaKnown RBP8.65□□□□□ -1.02
CTNND1-223ENST00000529986 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
CTNND1-223ENST00000529986 LACTBP83111 547 aaPredicted RBP8.65□□□□□ -1.03
CTNND1-223ENST00000529986 LONRF3Q496Y0 759 aa8.65□□□□□ -1.03
CTNND1-223ENST00000529986 CCDC122Q5T0U0 273 aa8.65□□□□□ -1.03
CTNND1-223ENST00000529986 SBNO2Q9Y2G9 1366 aa8.65□□□□□ -1.03
CTNND1-223ENST00000529986 FERP16591 822 aa8.65□□□□□ -1.03
CTNND1-223ENST00000529986 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.03
CTNND1-223ENST00000529986 TNIP1Q15025 636 aa8.65□□□□□ -1.03
CTNND1-223ENST00000529986 GDAP1L1Q96MZ0 367 aa8.65□□□□□ -1.03
CTNND1-223ENST00000529986 ASIC1P78348 528 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 SPAG1Q07617 926 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 CRACR2BQ8N4Y2 399 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-223ENST00000529986 ARFGAP2Q8N6H7 521 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GOLGA6CA6NDK9 693 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 ZBTB43O43298 467 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GOLGA6DP0CG33 693 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 CCDC77Q9BR77 488 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 ZBTB3Q9H5J0 574 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GOLGA6AQ9NYA3 693 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 ACTN2P35609 894 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 SEPT6Q14141 434 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 PNMA8AQ86V59 439 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-223ENST00000529986 NEK11Q8NG66 645 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 FERMT2Q96AC1 680 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 PLIN2Q99541 437 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 STIM2Q9P246 746 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 TSPY2A6NKD2 308 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 PSMA7O14818 248 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 GPTP24298 496 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 NMIQ13287 307 aaPredicted RBP8.64□□□□□ -1.03
CTNND1-223ENST00000529986 TTC14Q96N46 770 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 ADGBQ8N7X0 1667 aa8.64□□□□□ -1.03
CTNND1-223ENST00000529986 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 STMN4Q9H169 189 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 ZNF287Q9HBT7 754 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 NPHP3Q7Z494 1330 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 WDR7Q9Y4E6 1490 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 GCC2Q8IWJ2 1684 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 RXRAP19793 462 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 PSMC4P43686 418 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 SETDB1Q15047 1291 aa8.63□□□□□ -1.03
CTNND1-223ENST00000529986 TTF1Q15361 905 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-223ENST00000529986 B4GALNT4Q76KP1 1039 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms