RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 CHRDL2Q6WN34 429 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 IFNL1Q8IU54 200 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 TBC1D16Q8TBP0 767 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 LAMA3Q16787 3333 aa14.1□□□□□ -0.15
NEDD8-204ENST00000526430 USP17L8P0C7I0 530 aa14.09□□□□□ -0.15
NEDD8-204ENST00000526430 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
NEDD8-204ENST00000526430 LDLRAD1Q5T700 205 aa14.09□□□□□ -0.15
NEDD8-204ENST00000526430 ZC3H12CQ9C0D7 883 aaKnown RBP14.09□□□□□ -0.15
NEDD8-204ENST00000526430 EFCC1Q9HA90 598 aa14.09□□□□□ -0.15
NEDD8-204ENST00000526430 RBM27Q9P2N5 1060 aaKnown RBP14.09□□□□□ -0.15
NEDD8-204ENST00000526430 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
NEDD8-204ENST00000526430 ZBTB48P10074 688 aaPredicted RBP14.08□□□□□ -0.16
NEDD8-204ENST00000526430 GNAI1P63096 354 aa14.08□□□□□ -0.16
NEDD8-204ENST00000526430 SLFN5Q08AF3 891 aa14.08□□□□□ -0.16
NEDD8-204ENST00000526430 ARMC9Q7Z3E5 817 aa14.08□□□□□ -0.16
NEDD8-204ENST00000526430 CD99L2Q8TCZ2 262 aa14.08□□□□□ -0.16
NEDD8-204ENST00000526430 CELF1Q92879 486 aaKnown RBP14.08□□□□□ -0.16
NEDD8-204ENST00000526430 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.16
NEDD8-204ENST00000526430 PRO3102Q9H379 93 aa14.08□□□□□ -0.16
NEDD8-204ENST00000526430 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
NEDD8-204ENST00000526430 TRMT112Q9UI30 125 aaKnown RBP14.08□□□□□ -0.16
NEDD8-204ENST00000526430 LAS1LQ9Y4W2 734 aaKnown RBP14.08□□□□□ -0.16
NEDD8-204ENST00000526430 OTOFQ9HC10 1997 aa14.07□□□□□ -0.16
NEDD8-204ENST00000526430 COL1A1P02452 1464 aaPredicted RBP14.07□□□□□ -0.16
NEDD8-204ENST00000526430 HNRNPUQ00839 825 aaKnown RBP eCLIP14.07□□□□□ -0.16
NEDD8-204ENST00000526430 SF3B3Q15393 1217 aaKnown RBP14.07□□□□□ -0.16
NEDD8-204ENST00000526430 PRAMEF18Q5VWM3 479 aa14.07□□□□□ -0.16
NEDD8-204ENST00000526430 NBPF11Q86T75 865 aa14.07□□□□□ -0.16
NEDD8-204ENST00000526430 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
NEDD8-204ENST00000526430 C8orf58Q8NAV2 365 aa14.07□□□□□ -0.16
NEDD8-204ENST00000526430 UNC80Q8N2C7 3258 aa14.07□□□□□ -0.16
NEDD8-204ENST00000526430 IGF2BP3O00425 579 aaKnown RBP eCLIP14.06□□□□□ -0.16
NEDD8-204ENST00000526430 PDIA6Q15084 440 aa14.06□□□□□ -0.16
NEDD8-204ENST00000526430 SCAF8Q9UPN6 1271 aaKnown RBP14.06□□□□□ -0.16
NEDD8-204ENST00000526430 A0A1W2PPC1 479 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 G3V3G9 751 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 SP3Q02447 781 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
NEDD8-204ENST00000526430 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 NBPF9Q3BBW0 867 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 SLC9C1Q4G0N8 1177 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
NEDD8-204ENST00000526430 UNCXA6NJT0 531 aa14.04□□□□□ -0.16
NEDD8-204ENST00000526430 CRHR2Q13324 411 aa14.04□□□□□ -0.16
NEDD8-204ENST00000526430 MAP3K11Q16584 847 aa14.04□□□□□ -0.16
NEDD8-204ENST00000526430 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
NEDD8-204ENST00000526430 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
NEDD8-204ENST00000526430 WNT10BO00744 389 aa14.03□□□□□ -0.16
NEDD8-204ENST00000526430 MMP14P50281 582 aa14.03□□□□□ -0.16
NEDD8-204ENST00000526430 SLC4A8Q2Y0W8 1093 aa14.03□□□□□ -0.16
NEDD8-204ENST00000526430 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
NEDD8-204ENST00000526430 OTUD7BQ6GQQ9 843 aa14.03□□□□□ -0.16
NEDD8-204ENST00000526430 MYH3P11055 1940 aa14.03□□□□□ -0.16
NEDD8-204ENST00000526430 ZBED9Q6R2W3 1325 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 USP17L3A6NCW0 530 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 USP17L4A6NCW7 530 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.17
NEDD8-204ENST00000526430 VAMP4O75379 141 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 UFL1O94874 794 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 RPS8P62241 208 aaKnown RBP14.02□□□□□ -0.17
NEDD8-204ENST00000526430 CAP1Q01518 475 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 EXOSC9Q06265 439 aaKnown RBP14.02□□□□□ -0.17
NEDD8-204ENST00000526430 ARHGEF6Q15052 776 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 USP17L1Q7RTZ2 530 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 PODNQ7Z5L7 613 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 APOBEC3FQ8IUX4 373 aaKnown RBP14.02□□□□□ -0.17
NEDD8-204ENST00000526430 SLC10A4Q96EP9 437 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 WNK4Q96J92 1243 aa14.02□□□□□ -0.17
NEDD8-204ENST00000526430 ANGEL1Q9UNK9 670 aaKnown RBP14.02□□□□□ -0.17
NEDD8-204ENST00000526430 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
NEDD8-204ENST00000526430 OGFOD1Q8N543 542 aa14.01□□□□□ -0.17
NEDD8-204ENST00000526430 GGA1Q9UJY5 639 aa14.01□□□□□ -0.17
NEDD8-204ENST00000526430 PTCH2Q9Y6C5 1203 aa14.01□□□□□ -0.17
NEDD8-204ENST00000526430 MYO3BQ8WXR4 1341 aa14□□□□□ -0.17
NEDD8-204ENST00000526430 TESPA1A2RU30 521 aaPredicted RBP14□□□□□ -0.17
NEDD8-204ENST00000526430 E9PSI1 815 aa14□□□□□ -0.17
NEDD8-204ENST00000526430 COPS6Q7L5N1 327 aa14□□□□□ -0.17
NEDD8-204ENST00000526430 ANKIB1Q9P2G1 1089 aa14□□□□□ -0.17
NEDD8-204ENST00000526430 SSC5DA1L4H1 1573 aa14□□□□□ -0.17
NEDD8-204ENST00000526430 ALPK3Q96L96 1907 aa14□□□□□ -0.17
NEDD8-204ENST00000526430 HOXB7P09629 217 aa13.99□□□□□ -0.17
NEDD8-204ENST00000526430 PRKG1Q13976 671 aa13.99□□□□□ -0.17
NEDD8-204ENST00000526430 DACT2Q5SW24 774 aa13.98□□□□□ -0.17
NEDD8-204ENST00000526430 GPR153Q6NV75 609 aa13.98□□□□□ -0.17
NEDD8-204ENST00000526430 XAGE3Q8WTP9 111 aa13.98□□□□□ -0.17
NEDD8-204ENST00000526430 DPF3Q92784 378 aa13.98□□□□□ -0.17
NEDD8-204ENST00000526430 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
NEDD8-204ENST00000526430 XDHP47989 1333 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 ANXA1P04083 346 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 EIF2S2P20042 333 aaKnown RBP13.97□□□□□ -0.17
NEDD8-204ENST00000526430 UBE2Q1Q7Z7E8 422 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 CLMNQ96JQ2 1002 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 PTPN18Q99952 460 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 HTATIP2Q9BUP3 242 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 MYH16Q9H6N6 1097 aa13.97□□□□□ -0.17
NEDD8-204ENST00000526430 NR2E3Q9Y5X4 410 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms