RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PRPF40BQ6NWY9 871 aaKnown RBP13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 NBPF11Q86T75 865 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 NPHP4O75161 1426 aaPredicted RBP13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 FAM200AQ8TCP9 573 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 C8orf76Q96K31 380 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 ABCA8O94911 1581 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 TSG101Q99816 390 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 PAIP2Q9BPZ3 127 aaKnown RBP13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 GDPD2Q9HCC8 539 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 BCCIPQ9P287 314 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 FAM83GA6ND36 823 aa13.99□□□□□ -0.17
PCDHGA6-201ENST00000517434 TRIM27P14373 513 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 CEP112Q8N8E3 955 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 DNAI1Q9UI46 699 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 TUBBP07437 444 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 CETN2P41208 172 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 TTC6Q86TZ1 520 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 MYRIPQ8NFW9 859 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 HSF2BPO75031 334 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 DNAJC5Q9H3Z4 198 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 ZSWIM4Q9H7M6 989 aa13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 COL17A1Q9UMD9 1497 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA6-201ENST00000517434 NLRP1Q9C000 1473 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 RHPN1Q8TCX5 695 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 YEATS4O95619 227 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 PRIM1P49642 420 aaKnown RBP13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 AMPD3Q01432 767 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 BMP2KLQ5H9B9 411 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 CTAGE15A4D2H0 777 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 OPA1O60313 960 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 BMP15O95972 392 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 CTAGE8P0CG41 777 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 TSPY3P0CV98 308 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 TSPY8P0CW00 308 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 HLTFQ14527 1009 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 CTAGE6Q86UF2 777 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 CTAGE4Q8IX94 777 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 PIBF1Q8WXW3 757 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 TCP11L1Q9NUJ3 509 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 A0A1W2PP64 1363 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
PCDHGA6-201ENST00000517434 ERMNQ8TAM6 284 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 DENND2AQ9ULE3 1009 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 CETN1Q12798 172 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 MSL1Q68DK7 614 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 KRBA2Q6ZNG9 492 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 ATRIPQ8WXE1 791 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 VEZTQ9HBM0 779 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 MBD5Q9P267 1494 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 STX6O43752 255 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 LDHBP07195 334 aaKnown RBP13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 RXRBP28702 533 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 CCDC121Q6ZUS5 278 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 MAATS1Q7Z4T9 603 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 PLBD2Q8NHP8 589 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 SNX21Q969T3 373 aa13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCDHGA6-201ENST00000517434 ARHGEF5Q12774 1597 aa13.96□□□□□ -0.18
PCDHGA6-201ENST00000517434 TMEM94Q12767 1356 aa13.96□□□□□ -0.18
PCDHGA6-201ENST00000517434 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.18
PCDHGA6-201ENST00000517434 CKAP4Q07065 602 aaKnown RBP13.96□□□□□ -0.18
PCDHGA6-201ENST00000517434 PPM1EQ8WY54 764 aa13.96□□□□□ -0.18
PCDHGA6-201ENST00000517434 SNRKQ9NRH2 765 aa13.96□□□□□ -0.18
PCDHGA6-201ENST00000517434 NEBLO76041 1014 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 NAA25Q14CX7 972 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 C6orf163Q5TEZ5 329 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 GOLGA1Q92805 767 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 CALM1P0DP23 149 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 CALM2P0DP24 149 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 CALM3P0DP25 149 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 FAM196AQ6ZSG2 479 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 FBF1Q8TES7 1133 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 ERO1AQ96HE7 468 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 VPS18Q9P253 973 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 CHMP4BP1P59074 171 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 EHBP1Q8NDI1 1231 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
PCDHGA6-201ENST00000517434 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 ATP2C2O75185 946 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 ANXA1P04083 346 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 MLH3Q9UHC1 1453 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 ATP8B2P98198 1209 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 FSIP1Q8NA03 581 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 DRC1Q96MC2 740 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 CEP63Q96MT8 703 aa13.94□□□□□ -0.18
PCDHGA6-201ENST00000517434 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms