RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 KCNB2Q92953 911 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 PPP6R1Q9UPN7 881 aa12.36□□□□□ -0.43
BRIX1-205ENST00000515798 AOX1Q06278 1338 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 HMMRO75330 724 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 CCNHP51946 323 aaPredicted RBP12.35□□□□□ -0.43
BRIX1-205ENST00000515798 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
BRIX1-205ENST00000515798 CCDC83Q8IWF9 413 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 ABCB6Q9NP58 842 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 HYPKQ9NX55 129 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 RNF40O75150 1001 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 MYBL2P10244 700 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 ARID4AP29374 1257 aaPredicted RBP12.35□□□□□ -0.43
BRIX1-205ENST00000515798 CCT5P48643 541 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 SLC8A3P57103 927 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 CHMP4BP1P59074 171 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 RPS6KL1Q9Y6S9 549 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 CAPN7Q9Y6W3 813 aa12.35□□□□□ -0.43
BRIX1-205ENST00000515798 PLCH2O75038 1416 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 MAP3K4Q9Y6R4 1608 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 MAFGO15525 162 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
BRIX1-205ENST00000515798 PLCB4Q15147 1175 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 RBBP5Q15291 538 aaKnown RBP12.34□□□□□ -0.43
BRIX1-205ENST00000515798 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 AOPEPQ8N6M6 819 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 STAP2Q9UGK3 403 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
BRIX1-205ENST00000515798 CUTAO60888 179 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 SNUPNO95149 360 aaKnown RBP12.33□□□□□ -0.44
BRIX1-205ENST00000515798 LARGE1O95461 756 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 PDCD2Q16342 344 aaPredicted RBP12.33□□□□□ -0.44
BRIX1-205ENST00000515798 KIF4BQ2VIQ3 1234 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 LARP1BQ659C4 914 aaKnown RBP12.33□□□□□ -0.44
BRIX1-205ENST00000515798 RCSD1Q6JBY9 416 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.44
BRIX1-205ENST00000515798 CD248Q9HCU0 757 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 ADCY9O60503 1353 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 SLC5A9Q2M3M2 681 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 TLDC1Q6P9B6 456 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 B4GALNT4Q76KP1 1039 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 CPSF2Q9P2I0 782 aaKnown RBP12.33□□□□□ -0.44
BRIX1-205ENST00000515798 PPP2R2CQ9Y2T4 447 aa12.33□□□□□ -0.44
BRIX1-205ENST00000515798 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 SYF2O95926 243 aaKnown RBP12.32□□□□□ -0.44
BRIX1-205ENST00000515798 PRPHP41219 470 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 ARHGAP25P42331 645 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 CLNS1AP54105 237 aaKnown RBP12.32□□□□□ -0.44
BRIX1-205ENST00000515798 GNG11P61952 73 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 CDC37L1Q7L3B6 337 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 CCDC50Q8IVM0 306 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 TM6SF1Q9BZW5 370 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 PREX1Q8TCU6 1659 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 ANKRD26Q9UPS8 1709 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 RPS6KA3P51812 740 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 SMTNP53814 917 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 ST3GAL1Q11201 340 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 MTA1Q13330 715 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 YTHDF3Q7Z739 585 aaKnown RBP12.32□□□□□ -0.44
BRIX1-205ENST00000515798 SMARCC1Q92922 1105 aaPredicted RBP12.32□□□□□ -0.44
BRIX1-205ENST00000515798 DHX58Q96C10 678 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 WDR24Q96S15 920 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 PNKPQ96T60 521 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 PAGR1Q9BTK6 254 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 ATP6V0A4Q9HBG4 840 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 IFNKQ9P0W0 207 aa12.32□□□□□ -0.44
BRIX1-205ENST00000515798 SAMD9LQ8IVG5 1584 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 EVC2Q86UK5 1308 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 A6NNZ2 444 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 KINO60870 393 aaKnown RBP12.31□□□□□ -0.44
BRIX1-205ENST00000515798 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
BRIX1-205ENST00000515798 IRAK1P51617 712 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 TUBB8Q3ZCM7 444 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 CDCA2Q69YH5 1023 aaPredicted RBP12.31□□□□□ -0.44
BRIX1-205ENST00000515798 KIAA1328Q86T90 577 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 BATF3Q9NR55 127 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 KLC4Q9NSK0 619 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 ADGRB1O14514 1584 aa12.31□□□□□ -0.44
BRIX1-205ENST00000515798 PPFIA1Q13136 1202 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 IRAK4Q9NWZ3 460 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 ABCC3O15438 1527 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 VWDEQ8N2E2 1590 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 MYO1FO00160 1098 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 RASSF9O75901 435 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 PECAM1P16284 738 aaPredicted RBP12.3□□□□□ -0.44
BRIX1-205ENST00000515798 WDR93Q6P2C0 686 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 ANKRD23Q86SG2 305 aa12.3□□□□□ -0.44
BRIX1-205ENST00000515798 CDC23Q9UJX2 597 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms