RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 MINPP1Q9UNW1 487 aa15.49■□□□□ 0.07
PVT1-203ENST00000513868 SNX14Q9Y5W7 946 aa15.49■□□□□ 0.07
PVT1-203ENST00000513868 K7ELQ4 463 aaPredicted RBP15.48■□□□□ 0.07
PVT1-203ENST00000513868 RPS8P62241 208 aaKnown RBP15.48■□□□□ 0.07
PVT1-203ENST00000513868 DDR1Q08345 913 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 COL23A1Q86Y22 540 aaPredicted RBP15.48■□□□□ 0.07
PVT1-203ENST00000513868 LAMA4Q16363 1823 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 QSER1Q2KHR3 1735 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 WTIPA6NIX2 430 aaPredicted RBP15.48■□□□□ 0.07
PVT1-203ENST00000513868 SERPINB2P05120 415 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 MCMDC2Q4G0Z9 681 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 ZMYM1Q5SVZ6 1142 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 TFCP2L1Q9NZI6 479 aa15.48■□□□□ 0.07
PVT1-203ENST00000513868 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
PVT1-203ENST00000513868 RNF113AO15541 343 aaKnown RBP15.47■□□□□ 0.07
PVT1-203ENST00000513868 CYP2E1P05181 493 aaPredicted RBP15.47■□□□□ 0.07
PVT1-203ENST00000513868 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
PVT1-203ENST00000513868 CCDC129Q6ZRS4 1044 aa15.47■□□□□ 0.07
PVT1-203ENST00000513868 SPRYD3Q8NCJ5 442 aa15.47■□□□□ 0.07
PVT1-203ENST00000513868 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
PVT1-203ENST00000513868 RBM8AQ9Y5S9 174 aaKnown RBP15.47■□□□□ 0.07
PVT1-203ENST00000513868 NEK4P51957 841 aa15.46■□□□□ 0.07
PVT1-203ENST00000513868 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
PVT1-203ENST00000513868 HMG20BQ9P0W2 317 aa15.46■□□□□ 0.07
PVT1-203ENST00000513868 NPHP1O15259 732 aa15.45■□□□□ 0.06
PVT1-203ENST00000513868 ST18O60284 1047 aa15.45■□□□□ 0.06
PVT1-203ENST00000513868 DDIT3P35638 169 aa15.45■□□□□ 0.06
PVT1-203ENST00000513868 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
PVT1-203ENST00000513868 CRY2Q49AN0 593 aa15.45■□□□□ 0.06
PVT1-203ENST00000513868 PRPF40BQ6NWY9 871 aaKnown RBP15.45■□□□□ 0.06
PVT1-203ENST00000513868 MAST3O60307 1309 aa15.45■□□□□ 0.06
PVT1-203ENST00000513868 BCAMP50895 628 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 CREB3L3Q68CJ9 461 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 PIH1D3Q9NQM4 214 aaKnown RBP15.44■□□□□ 0.06
PVT1-203ENST00000513868 ZNF804BA4D1E1 1349 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 PNPLA7Q6ZV29 1317 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 SLC27A2O14975 620 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 ZFYP08048 801 aaPredicted RBP15.44■□□□□ 0.06
PVT1-203ENST00000513868 SPATA5Q8NB90 893 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 OSBP2Q969R2 916 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 CAMKK2Q96RR4 588 aa15.44■□□□□ 0.06
PVT1-203ENST00000513868 UPF3BQ9BZI7 483 aaKnown RBP15.44■□□□□ 0.06
PVT1-203ENST00000513868 M0R2C6 588 aa15.43■□□□□ 0.06
PVT1-203ENST00000513868 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
PVT1-203ENST00000513868 ADCK5Q3MIX3 580 aa15.43■□□□□ 0.06
PVT1-203ENST00000513868 FLAD1Q8NFF5 587 aa15.43■□□□□ 0.06
PVT1-203ENST00000513868 KLRG2A4D1S0 409 aaPredicted RBP15.42■□□□□ 0.06
PVT1-203ENST00000513868 ST5P78524 1137 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 GRAPQ13588 217 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 VPS53Q5VIR6 699 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 NLGN1Q8N2Q7 840 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 GRAPLQ8TC17 118 aaPredicted RBP15.42■□□□□ 0.06
PVT1-203ENST00000513868 TTC14Q96N46 770 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 TAF6LQ9Y6J9 622 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 LRRC37AA6NMS7 1700 aa15.42■□□□□ 0.06
PVT1-203ENST00000513868 COL11A2P13942 1736 aaPredicted RBP15.42■□□□□ 0.06
PVT1-203ENST00000513868 RPAP1Q9BWH6 1393 aaPredicted RBP15.42■□□□□ 0.06
PVT1-203ENST00000513868 ADD2P35612 726 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 EZH2Q15910 746 aaKnown RBP15.41■□□□□ 0.06
PVT1-203ENST00000513868 LRRFIP1Q32MZ4 808 aaKnown RBP15.41■□□□□ 0.06
PVT1-203ENST00000513868 TSGA10IPQ3SY00 556 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 SLC51AQ86UW1 340 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 IL27Q8NEV9 243 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 ANKRD2Q9GZV1 360 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 IRS2Q9Y4H2 1338 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 COL1A1P02452 1464 aaPredicted RBP15.41■□□□□ 0.06
PVT1-203ENST00000513868 KLRK1P26718 216 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 GYG1P46976 350 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 KCNJ4P48050 445 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 EN1Q05925 392 aaPredicted RBP15.41■□□□□ 0.06
PVT1-203ENST00000513868 APPBP2Q92624 585 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 FAM84BQ96KN1 310 aaPredicted RBP15.41■□□□□ 0.06
PVT1-203ENST00000513868 DSCC1Q9BVC3 393 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 PUS7LQ9H0K6 701 aaKnown RBP15.41■□□□□ 0.06
PVT1-203ENST00000513868 ZSWIM6Q9HCJ5 1215 aa15.41■□□□□ 0.06
PVT1-203ENST00000513868 LTBP1Q14766 1721 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 CACNA1SQ13698 1873 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 FOXP2O15409 715 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 HSPD1P10809 573 aaKnown RBP15.4■□□□□ 0.06
PVT1-203ENST00000513868 HOXA10P31260 410 aaPredicted RBP15.4■□□□□ 0.06
PVT1-203ENST00000513868 MCM2P49736 904 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 COL9A3Q14050 684 aaPredicted RBP15.4■□□□□ 0.06
PVT1-203ENST00000513868 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 FBXO33Q7Z6M2 555 aa15.4■□□□□ 0.06
PVT1-203ENST00000513868 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.4■□□□□ 0.06
PVT1-203ENST00000513868 ANO8Q9HCE9 1232 aaPredicted RBP15.4■□□□□ 0.06
PVT1-203ENST00000513868 U3KPZ7 1027 aaPredicted RBP15.4■□□□□ 0.06
PVT1-203ENST00000513868 CPA1P15085 419 aa15.39■□□□□ 0.05
PVT1-203ENST00000513868 ZKSCAN1P17029 563 aaPredicted RBP15.39■□□□□ 0.05
PVT1-203ENST00000513868 CASTP20810 708 aaKnown RBP15.39■□□□□ 0.05
PVT1-203ENST00000513868 UBE3CQ15386 1083 aa15.39■□□□□ 0.05
PVT1-203ENST00000513868 SLC9C2Q5TAH2 1124 aa15.39■□□□□ 0.05
PVT1-203ENST00000513868 ZSCAN25Q6NSZ9 544 aa15.39■□□□□ 0.05
PVT1-203ENST00000513868 TMX3Q96JJ7 454 aa15.39■□□□□ 0.05
PVT1-203ENST00000513868 JAKMIP1Q96N16 626 aaKnown RBP15.39■□□□□ 0.05
PVT1-203ENST00000513868 WWC3Q9ULE0 1092 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms