RNA–Protein interactions for RNA: ENST00000513259.5

SNHG4-207, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 5

Gene SNHG4, Length 444 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-207ENST00000513259 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
SNHG4-207ENST00000513259 SCAF8Q9UPN6 1271 aaKnown RBP11.57□□□□□ -0.56
SNHG4-207ENST00000513259 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
SNHG4-207ENST00000513259 UFL1O94874 794 aa11.56□□□□□ -0.56
SNHG4-207ENST00000513259 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
SNHG4-207ENST00000513259 LMOD3Q0VAK6 560 aa11.56□□□□□ -0.56
SNHG4-207ENST00000513259 HDGFL1Q5TGJ6 251 aa11.56□□□□□ -0.56
SNHG4-207ENST00000513259 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
SNHG4-207ENST00000513259 IFNL1Q8IU54 200 aa11.56□□□□□ -0.56
SNHG4-207ENST00000513259 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
SNHG4-207ENST00000513259 PODXL2Q9NZ53 605 aa11.56□□□□□ -0.56
SNHG4-207ENST00000513259 CIZ1Q9ULV3 898 aaPredicted RBP11.56□□□□□ -0.56
SNHG4-207ENST00000513259 UBE2Q2LH0YL09 131 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 TBC1D8O95759 1140 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 TRIM28Q13263 835 aaKnown RBP11.55□□□□□ -0.56
SNHG4-207ENST00000513259 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
SNHG4-207ENST00000513259 PRAMEF18Q5VWM3 479 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 CCDC146Q8IYE0 955 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 DBF4Q9UBU7 674 aaPredicted RBP11.55□□□□□ -0.56
SNHG4-207ENST00000513259 GGA1Q9UJY5 639 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 PSME4Q14997 1843 aa11.55□□□□□ -0.56
SNHG4-207ENST00000513259 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
SNHG4-207ENST00000513259 AGBL3Q8NEM8 1001 aa11.54□□□□□ -0.56
SNHG4-207ENST00000513259 ZNF296Q8WUU4 475 aaPredicted RBP11.54□□□□□ -0.56
SNHG4-207ENST00000513259 JARID2Q92833 1246 aaPredicted RBP11.54□□□□□ -0.56
SNHG4-207ENST00000513259 GMLQ99445 158 aa11.54□□□□□ -0.56
SNHG4-207ENST00000513259 MYOZ2Q9NPC6 264 aa11.54□□□□□ -0.56
SNHG4-207ENST00000513259 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
SNHG4-207ENST00000513259 PAPPA2Q9BXP8 1791 aa11.54□□□□□ -0.56
SNHG4-207ENST00000513259 USP17L8P0C7I0 530 aa11.53□□□□□ -0.56
SNHG4-207ENST00000513259 FKBP1BP68106 108 aa11.53□□□□□ -0.56
SNHG4-207ENST00000513259 ZBTB38Q8NAP3 1195 aaPredicted RBP11.53□□□□□ -0.56
SNHG4-207ENST00000513259 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
SNHG4-207ENST00000513259 HYPKQ9NX55 129 aa11.53□□□□□ -0.56
SNHG4-207ENST00000513259 HDAC9Q9UKV0 1011 aa11.53□□□□□ -0.56
SNHG4-207ENST00000513259 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
SNHG4-207ENST00000513259 ZNF609O15014 1411 aa11.52□□□□□ -0.56
SNHG4-207ENST00000513259 USP17L3A6NCW0 530 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 USP17L4A6NCW7 530 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
SNHG4-207ENST00000513259 C7P10643 843 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 ATN1P54259 1190 aaPredicted RBP11.52□□□□□ -0.57
SNHG4-207ENST00000513259 MKRN3Q13064 507 aaKnown RBP11.52□□□□□ -0.57
SNHG4-207ENST00000513259 PKN2Q16513 984 aaKnown RBP11.52□□□□□ -0.57
SNHG4-207ENST00000513259 NBPF9Q3BBW0 867 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 USP17L1Q7RTZ2 530 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
SNHG4-207ENST00000513259 MXD3Q9BW11 206 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 PITPNM2Q9BZ72 1349 aa11.52□□□□□ -0.57
SNHG4-207ENST00000513259 TTLL13PA6NNM8 815 aa11.51□□□□□ -0.57
SNHG4-207ENST00000513259 HOXB7P09629 217 aa11.51□□□□□ -0.57
SNHG4-207ENST00000513259 TM4SF4P48230 202 aa11.51□□□□□ -0.57
SNHG4-207ENST00000513259 TTLL12Q14166 644 aaPredicted RBP11.51□□□□□ -0.57
SNHG4-207ENST00000513259 DUSP27Q5VZP5 1158 aa11.51□□□□□ -0.57
SNHG4-207ENST00000513259 MYD88Q99836 296 aa11.51□□□□□ -0.57
SNHG4-207ENST00000513259 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
SNHG4-207ENST00000513259 GPR25O00155 361 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 PDE8AO60658 829 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 ATP2B4P23634 1241 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 GOLGA2Q08379 1002 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 XDHP47989 1333 aa11.5□□□□□ -0.57
SNHG4-207ENST00000513259 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
SNHG4-207ENST00000513259 HSP90B1P14625 803 aaKnown RBP11.49□□□□□ -0.57
SNHG4-207ENST00000513259 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
SNHG4-207ENST00000513259 CCDC191Q8NCU4 936 aa11.49□□□□□ -0.57
SNHG4-207ENST00000513259 RUNDC1Q96C34 613 aa11.49□□□□□ -0.57
SNHG4-207ENST00000513259 ZNF646O15015 1829 aaPredicted RBP11.49□□□□□ -0.57
SNHG4-207ENST00000513259 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
SNHG4-207ENST00000513259 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
SNHG4-207ENST00000513259 PTPN12Q05209 780 aaKnown RBP11.48□□□□□ -0.57
SNHG4-207ENST00000513259 PRKG1Q13976 671 aa11.48□□□□□ -0.57
SNHG4-207ENST00000513259 RALBP1Q15311 655 aa11.48□□□□□ -0.57
SNHG4-207ENST00000513259 DACT2Q5SW24 774 aa11.48□□□□□ -0.57
SNHG4-207ENST00000513259 FBXO46Q6PJ61 603 aaPredicted RBP11.48□□□□□ -0.57
SNHG4-207ENST00000513259 MBIPQ9NS73 344 aa11.48□□□□□ -0.57
SNHG4-207ENST00000513259 CWC25Q9NXE8 425 aaPredicted RBP11.48□□□□□ -0.57
SNHG4-207ENST00000513259 HTTP42858 3142 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 WNT10BO00744 389 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 FKTNO75072 461 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 SASH1O94885 1247 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 NOM1Q5C9Z4 860 aaKnown RBP11.47□□□□□ -0.57
SNHG4-207ENST00000513259 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 MINPP1Q9UNW1 487 aa11.47□□□□□ -0.57
SNHG4-207ENST00000513259 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
SNHG4-207ENST00000513259 CENPFP49454 3210 aa11.46□□□□□ -0.57
SNHG4-207ENST00000513259 NF2P35240 595 aa11.46□□□□□ -0.57
SNHG4-207ENST00000513259 SREBF2Q12772 1141 aa11.46□□□□□ -0.57
SNHG4-207ENST00000513259 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
SNHG4-207ENST00000513259 OGFOD1Q8N543 542 aa11.46□□□□□ -0.57
SNHG4-207ENST00000513259 METTL22Q9BUU2 404 aaPredicted RBP11.46□□□□□ -0.57
SNHG4-207ENST00000513259 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
SNHG4-207ENST00000513259 FZD1Q9UP38 647 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms