RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 MEIS3Q99687 375 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 KSR2Q6VAB6 950 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 RASSF4Q9H2L5 321 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 LDHBP07195 334 aaKnown RBP18.34■□□□□ 0.53
TRIO-221ENST00000513206 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 BMP2KLQ5H9B9 411 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
TRIO-221ENST00000513206 GNPATO15228 680 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 GNAT2P19087 354 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 SPECC1Q5M775 1068 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 TMC6Q7Z403 805 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 GJA3Q9Y6H8 435 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 PCDH11XQ9BZA7 1347 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 PCDH11YQ9BZA8 1340 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 AFMP43652 599 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 LRSAM1Q6UWE0 723 aa18.33■□□□□ 0.53
TRIO-221ENST00000513206 TNNI2P48788 182 aa18.33■□□□□ 0.52
TRIO-221ENST00000513206 TRMT1Q9NXH9 659 aaKnown RBP18.33■□□□□ 0.52
TRIO-221ENST00000513206 UBE2HP62256 183 aa18.33■□□□□ 0.52
TRIO-221ENST00000513206 FAM212AQ96EL1 285 aa18.33■□□□□ 0.52
TRIO-221ENST00000513206 JAG2Q9Y219 1238 aa18.33■□□□□ 0.52
TRIO-221ENST00000513206 WDR70Q9NW82 654 aa18.33■□□□□ 0.52
TRIO-221ENST00000513206 SSX2IPQ9Y2D8 614 aa18.33■□□□□ 0.52
TRIO-221ENST00000513206 DNMT1P26358 1616 aaKnown RBP18.33■□□□□ 0.52
TRIO-221ENST00000513206 RRP36Q96EU6 259 aaKnown RBP18.32■□□□□ 0.52
TRIO-221ENST00000513206 ABCC10Q5T3U5 1492 aa18.32■□□□□ 0.52
TRIO-221ENST00000513206 MAP3K5Q99683 1374 aa18.32■□□□□ 0.52
TRIO-221ENST00000513206 IFI16Q16666 785 aaKnown RBP18.32■□□□□ 0.52
TRIO-221ENST00000513206 ACTN2P35609 894 aa18.32■□□□□ 0.52
TRIO-221ENST00000513206 IRS4O14654 1257 aaPredicted RBP18.32■□□□□ 0.52
TRIO-221ENST00000513206 EIF4A2Q14240 407 aaKnown RBP18.32■□□□□ 0.52
TRIO-221ENST00000513206 HS1BP3Q53T59 392 aa18.32■□□□□ 0.52
TRIO-221ENST00000513206 Q6ZUG5 572 aa18.32■□□□□ 0.52
TRIO-221ENST00000513206 MRPS9P82933 396 aaKnown RBP18.31■□□□□ 0.52
TRIO-221ENST00000513206 LRRC45Q96CN5 670 aa18.31■□□□□ 0.52
TRIO-221ENST00000513206 JADE2Q9NQC1 790 aa18.31■□□□□ 0.52
TRIO-221ENST00000513206 FLT4P35916 1363 aa18.31■□□□□ 0.52
TRIO-221ENST00000513206 GSDMDP57764 484 aa18.31■□□□□ 0.52
TRIO-221ENST00000513206 TCHPQ9BT92 498 aa18.31■□□□□ 0.52
TRIO-221ENST00000513206 NUCB1Q02818 461 aa18.31■□□□□ 0.52
TRIO-221ENST00000513206 RBM17Q96I25 401 aaKnown RBP18.31■□□□□ 0.52
TRIO-221ENST00000513206 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
TRIO-221ENST00000513206 KRT13P13646 458 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 HSPA2P54652 639 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 EYA3Q99504 573 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 TTC12Q9H892 705 aaPredicted RBP18.3■□□□□ 0.52
TRIO-221ENST00000513206 SSFA2P28290 1259 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 IMPG2Q9BZV3 1241 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 CHD1O14646 1710 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 SDSP20132 328 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 ANKRD2Q9GZV1 360 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 PICK1Q9NRD5 415 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 DPH6Q7L8W6 267 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 BMP15O95972 392 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 PLVAPQ9BX97 442 aa18.3■□□□□ 0.52
TRIO-221ENST00000513206 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 NECAB1Q8N987 351 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 FSD2A1L4K1 749 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
TRIO-221ENST00000513206 TSNARE1Q96NA8 513 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 RRAGDQ9NQL2 400 aaPredicted RBP18.29■□□□□ 0.52
TRIO-221ENST00000513206 IKBKGQ9Y6K9 419 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 CALML3P27482 149 aa18.29■□□□□ 0.52
TRIO-221ENST00000513206 RBM8AQ9Y5S9 174 aaKnown RBP18.29■□□□□ 0.52
TRIO-221ENST00000513206 KCNG4Q8TDN1 519 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 OGFRQ9NZT2 677 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 HELBQ8NG08 1087 aaPredicted RBP18.28■□□□□ 0.52
TRIO-221ENST00000513206 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRIO-221ENST00000513206 ZBTB21Q9ULJ3 1066 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 RTL9Q8NET4 1388 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
TRIO-221ENST00000513206 WDR62O43379 1518 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
TRIO-221ENST00000513206 GCP02774 474 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 ZKSCAN5Q9Y2L8 839 aa18.28■□□□□ 0.52
TRIO-221ENST00000513206 ZMYM3Q14202 1370 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
TRIO-221ENST00000513206 N4BP3O15049 544 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 CNBD1Q8NA66 436 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 KRT2P35908 639 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 CHST3Q7LGC8 479 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 UBASH3AP57075 661 aa18.27■□□□□ 0.52
TRIO-221ENST00000513206 C10orf67Q8IYJ2 551 aa18.27■□□□□ 0.51
TRIO-221ENST00000513206 ZNF165P49910 485 aa18.27■□□□□ 0.51
TRIO-221ENST00000513206 SARNPP82979 210 aaKnown RBP18.27■□□□□ 0.51
TRIO-221ENST00000513206 RRAGBQ5VZM2 374 aa18.27■□□□□ 0.51
TRIO-221ENST00000513206 UHRF1BP1Q6BDS2 1440 aa18.26■□□□□ 0.51
TRIO-221ENST00000513206 PA2G4Q9UQ80 394 aaKnown RBP18.26■□□□□ 0.51
TRIO-221ENST00000513206 ADCY5O95622 1261 aa18.26■□□□□ 0.51
TRIO-221ENST00000513206 CPSF2Q9P2I0 782 aaKnown RBP18.26■□□□□ 0.51
TRIO-221ENST00000513206 NEMFO60524 1076 aa18.26■□□□□ 0.51
TRIO-221ENST00000513206 BRF1Q92994 677 aa18.26■□□□□ 0.51
TRIO-221ENST00000513206 RNF187Q5TA31 235 aaPredicted RBP18.26■□□□□ 0.51
TRIO-221ENST00000513206 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms