RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 EFSO43281 561 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 GFRA3O60609 400 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 LIG3P49916 1009 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 TCF12Q99081 682 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 NT5C1AQ9BXI3 368 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 TRIM55Q9BYV6 548 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 ZNF408Q9H9D4 720 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 GINM1Q9NU53 330 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 ZFATQ9P243 1243 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 R3HCC1Q9Y3T6 440 aaKnown RBP9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 TBX22Q9Y458 520 aa9.12□□□□□ -0.95
AP001960.1-201ENST00000506494 K7ELQ4 463 aaPredicted RBP9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 CLSTN1O94985 981 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 KIF4AO95239 1232 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 LMNB1P20700 586 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 ZNF746Q6NUN9 644 aaPredicted RBP9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 NUCKS1Q9H1E3 243 aaKnown RBP9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 MARK1Q9P0L2 795 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 PDZRN3Q9UPQ7 1066 aa9.11□□□□□ -0.95
AP001960.1-201ENST00000506494 H7C1W4 665 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 MAN1A2O60476 641 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 SPEM2Q0P670 501 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 APOBRQ0VD83 1088 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 NEUROD1Q13562 356 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 PHC3Q8NDX5 983 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 BHMTQ93088 406 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 RHOVQ96L33 236 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 MRVI1Q9Y6F6 885 aa9.1□□□□□ -0.95
AP001960.1-201ENST00000506494 MAP3K6O95382 1288 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 PF4P02776 101 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 CELA3AP09093 270 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 MAPTP10636 758 aaKnown RBP9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 SOX9P48436 509 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 TNP2Q05952 138 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 DIEXFQ68CQ4 756 aaKnown RBP9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 TTBK2Q6IQ55 1244 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 ANKS3Q6ZW76 656 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 TRIM46Q7Z4K8 759 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 GOLM1Q8NBJ4 401 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 TLR6Q9Y2C9 796 aa9.09□□□□□ -0.95
AP001960.1-201ENST00000506494 AVPP01185 164 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 ACPPP15309 386 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 LMNB2Q03252 620 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 CAMK2GQ13555 558 aaPredicted RBP9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 COL13A1Q5TAT6 717 aaPredicted RBP9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 ZNF662Q6ZS27 426 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 DHX32Q7L7V1 743 aaKnown RBP9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 ASAP3Q8TDY4 903 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 NKD1Q969G9 470 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 MKL1Q969V6 931 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 CNTNAP3BQ96NU0 1288 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 CNTNAP3Q9BZ76 1288 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 KCNQ5Q9NR82 932 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 DZANK1Q9NVP4 752 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 SIRPGQ9P1W8 387 aa9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 GPN3Q9UHW5 284 aaPredicted RBP9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.08□□□□□ -0.96
AP001960.1-201ENST00000506494 HOXD8P13378 290 aaPredicted RBP9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 ITPKAP23677 461 aa9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 ETFBP38117 255 aa9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 GRIA4P48058 902 aa9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 CEP120Q8N960 986 aa9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 ANAPC16Q96DE5 110 aa9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 SRPK1Q96SB4 655 aaKnown RBP9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 UBP1Q9NZI7 540 aa9.07□□□□□ -0.96
AP001960.1-201ENST00000506494 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 A0A096LPE4 126 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 A0A1W2PPZ6 126 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 METTL12A8MUP2 240 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 TRPA1O75762 1119 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 NRLP54845 237 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 SERINC3Q13530 473 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 SPRED3Q2MJR0 410 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 TMEM102Q8N9M5 508 aaPredicted RBP9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 NECAB3Q96P71 396 aaPredicted RBP9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 BHLHE41Q9C0J9 482 aaPredicted RBP9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 STRN4Q9NRL3 753 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 SAMM50Q9Y512 469 aa9.06□□□□□ -0.96
AP001960.1-201ENST00000506494 SBNO2Q9Y2G9 1366 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 GREM1O60565 184 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 RPS26P62854 115 aaKnown RBP9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 PCNX4Q63HM2 1172 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 EGFLAMQ63HQ2 1017 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 AGMOQ6ZNB7 445 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 RAB44Q7Z6P3 723 aaPredicted RBP9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 JAZF1Q86VZ6 243 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 NLGN1Q8N2Q7 840 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 SRRTQ9BXP5 876 aaKnown RBP9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 RBSNQ9H1K0 784 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 SEC31BQ9NQW1 1179 aa9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 MRPL42Q9Y6G3 142 aaKnown RBP9.05□□□□□ -0.96
AP001960.1-201ENST00000506494 PDE2AO00408 941 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms