RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ST5P78524 1137 aa8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 PI16Q6UXB8 463 aa8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 CNTROBQ8N137 903 aa8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 ZNF646O15015 1829 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 C10orf71Q711Q0 1435 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 RFX7Q2KHR2 1363 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 MED23Q9ULK4 1368 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 MCAMP43121 646 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 PHKA1P46020 1223 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 GRAPQ13588 217 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 CCDC102BQ68D86 513 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 DDX46Q7L014 1031 aaKnown RBP8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 LPIN2Q92539 896 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 ZNF512BQ96KM6 892 aaPredicted RBP8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 KIF2CQ99661 725 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 BRIP1Q9BX63 1249 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 ANTXR1Q9H6X2 564 aa8.4□□□□□ -1.06
TOPBP1-203ENST00000503464 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.07
TOPBP1-203ENST00000503464 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.07
TOPBP1-203ENST00000503464 CHD4Q14839 1912 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 ZNF804BA4D1E1 1349 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 A0A0D9SFI3 127 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 GOLIM4O00461 696 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 NPHP1O15259 732 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 SGSM2O43147 1006 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 SRGNP10124 158 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 SLC5A1P13866 664 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 SLFNL1Q499Z3 407 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 FAM227BQ96M60 508 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 DNAJC2Q99543 621 aaKnown RBP8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 USP26Q9BXU7 913 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 C22orf23Q9BZE7 217 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
TOPBP1-203ENST00000503464 IFIT1P09914 478 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 ZAP70P43403 619 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 BCAMP50895 628 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 RASGRF1Q13972 1273 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 TTC39AQ5SRH9 613 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 KBTBD3Q8NAB2 608 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 RPGRQ92834 1020 aaKnown RBP8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 CRAMP1Q96RY5 1269 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 FSD1Q9BTV5 496 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 PAG1Q9NWQ8 432 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 PARP3Q9Y6F1 533 aa8.38□□□□□ -1.07
TOPBP1-203ENST00000503464 SNED1Q8TER0 1413 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 CYP2E1P05181 493 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 GYG1P46976 350 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 GPSM2P81274 684 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 UBE4AQ14139 1066 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 CCDC158Q5M9N0 1113 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 CASC1Q6TDU7 716 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 CWC27Q6UX04 472 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 ZNF589Q86UQ0 364 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 FAM84BQ96KN1 310 aaPredicted RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 LSG1Q9H089 658 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 PIH1D3Q9NQM4 214 aaKnown RBP8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 HMG20BQ9P0W2 317 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 LAMA4Q16363 1823 aa8.37□□□□□ -1.07
TOPBP1-203ENST00000503464 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 RAD50Q92878 1312 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 REC8O95072 547 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 NPR1P16066 1061 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 PTH1RQ03431 593 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 GORABQ5T7V8 394 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 FBXO33Q7Z6M2 555 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 GPR101Q96P66 508 aaPredicted RBP8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 SEC62Q99442 399 aaKnown RBP8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 ANKRD2Q9GZV1 360 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 DIAPH3Q9NSV4 1193 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 PALD1Q9ULE6 856 aa8.36□□□□□ -1.07
TOPBP1-203ENST00000503464 MAST3O60307 1309 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 XDHP47989 1333 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 PPEF1O14829 653 aaPredicted RBP8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 FOXP2O15409 715 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 BBOX1O75936 387 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 CHRNA5P30532 468 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 PDE6BP35913 854 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 ANP32AP39687 249 aaKnown RBP8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 ZMYM1Q5SVZ6 1142 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 CCDC129Q6ZRS4 1044 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 C2CD5Q86YS7 1000 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 SPATA5Q8NB90 893 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
TOPBP1-203ENST00000503464 MASTLQ96GX5 879 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms