RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 USP17L11C9JVI0 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L21D6R901 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L18D6R9N7 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L22D6RA61 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L17D6RBQ6 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L19D6RCP7 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L20D6RJB6 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 PTPRAP18433 802 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 USP17L24Q0WX57 530 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 AGBL5Q8NDL9 886 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 ATG3Q9NT62 314 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 CCDC39Q9UFE4 941 aa5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 FNDC3AQ9Y2H6 1198 aaKnown RBP5.04□□□□□ -1.6
HMGB1P35-201ENST00000503360 H3BRJ5 948 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 ADAM11O75078 769 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 BRD2P25440 801 aaKnown RBP5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 PREPP48147 710 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 CEP135Q66GS9 1140 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 PIK3R5Q8WYR1 880 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 COL26A1Q96A83 441 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 ARXQ96QS3 562 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 PBX4Q9BYU1 374 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 SUGCTQ9HAC7 445 aa5.03□□□□□ -1.6
HMGB1P35-201ENST00000503360 FAM177BA6PVY3 158 aa5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 EIF4EBP3O60516 100 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 EPHA1P21709 976 aa5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 HOXA10P31260 410 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 TRIP4Q15650 581 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 COX20Q5RI15 118 aa5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 NFXL1Q6ZNB6 911 aa5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 CEP120Q8N960 986 aa5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 KCNF1Q9H3M0 494 aa5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 BSDC1Q9NW68 430 aaPredicted RBP5.02□□□□□ -1.61
HMGB1P35-201ENST00000503360 UBTFP17480 764 aaKnown RBP5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 MAP4P27816 1152 aaKnown RBP5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 CABP4P57796 275 aa5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 FDX2Q6P4F2 183 aa5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 KLHDC7BQ96G42 594 aa5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 RUSC1Q9BVN2 902 aa5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 OSBPL1AQ9BXW6 950 aa5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 USP20Q9Y2K6 914 aa5.01□□□□□ -1.61
HMGB1P35-201ENST00000503360 UBAP1LF5GYI3 381 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 F13BP05160 661 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 ATP11AP98196 1134 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 FBLN7Q53RD9 439 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 COL13A1Q5TAT6 717 aaPredicted RBP5□□□□□ -1.61
HMGB1P35-201ENST00000503360 TTC39BQ5VTQ0 682 aaPredicted RBP5□□□□□ -1.61
HMGB1P35-201ENST00000503360 SMG8Q8ND04 991 aaKnown RBP5□□□□□ -1.61
HMGB1P35-201ENST00000503360 UBASH3BQ8TF42 649 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 MFSD14AQ96MC6 490 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 CARD10Q9BWT7 1032 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 KRTAP4-11Q9BYQ6 195 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 PPP1R12CQ9BZL4 782 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 LACRTQ9GZZ8 138 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 RASSF4Q9H2L5 321 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 VRTNQ9H8Y1 702 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 TIMELESSQ9UNS1 1208 aa5□□□□□ -1.61
HMGB1P35-201ENST00000503360 DBX1A6NMT0 343 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 GAS2O43903 313 aaKnown RBP4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 TIAF1O95411 115 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 TXNDC11Q6PKC3 985 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 ETFBKMTQ8IXQ9 262 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 GLMNQ92990 594 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 POP1Q99575 1024 aaKnown RBP4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 TMPRSS13Q9BYE2 586 aa4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 ABI2Q9NYB9 513 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P35-201ENST00000503360 DDX3YO15523 660 aaKnown RBP4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 SCNN1AP37088 669 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 ARL4DP49703 201 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 COL19A1Q14993 1142 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 SWI5Q1ZZU3 235 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 PDE12Q6L8Q7 609 aaKnown RBP4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 C16orf46Q6P387 395 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 PAOXQ6QHF9 649 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 TP53INP2Q8IXH6 220 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 ZMYND15Q9H091 742 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 CYP4F12Q9HCS2 524 aa4.98□□□□□ -1.61
HMGB1P35-201ENST00000503360 BIN1O00499 593 aa4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 ADAMTSL4Q6UY14 1074 aa4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 ERICH6Q7L0X2 663 aa4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 C14orf37Q86TY3 774 aa4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 FNBP4Q8N3X1 1017 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 FAM200AQ8TCP9 573 aa4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 EZH1Q92800 747 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 SOX17Q9H6I2 414 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P35-201ENST00000503360 FAM95CA0A1B0GW59 222 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 A6NJR5 290 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 CYP26A1O43174 497 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 RPLP1P05386 114 aaKnown RBP4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 CYP27A1Q02318 531 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 C19orf57Q0VDD7 668 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 FKBP5Q13451 457 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 NUTM2GQ5VZR2 741 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 ZAR1Q86SH2 424 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 PAK6Q9NQU5 681 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 SH2B1Q9NRF2 756 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 SOX13Q9UN79 622 aa4.96□□□□□ -1.62
HMGB1P35-201ENST00000503360 NFKBIEO00221 500 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms