RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 NBPF20Q3BBV1 942 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 ZNF592Q92610 1267 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 NEUROD6Q96NK8 337 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TM6SF1Q9BZW5 370 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 KDM4CQ9H3R0 1056 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TNS3Q68CZ2 1445 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 KIF1AQ12756 1690 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TAF5LO75529 589 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 CCDC172P0C7W6 258 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TNNT3P45378 269 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 GYS2P54840 703 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 RAD51AP2Q09MP3 1159 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 RABL6Q3YEC7 729 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 BLOC1S2Q6QNY1 142 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 BARGINQ6ZT62 677 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 CDC37L1Q7L3B6 337 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 CEP120Q8N960 986 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 RNF217Q8TC41 542 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 KCNB2Q92953 911 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 RNF25Q96BH1 459 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 ZNF594Q96JF6 807 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 LRRC2Q9BYS8 371 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 STRN4Q9NRL3 753 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 ZNF219Q9P2Y4 722 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 CTNNA3Q9UI47 895 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 MED23Q9ULK4 1368 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 HIP1O00291 1037 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 CASP7P55210 303 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 HNRNPH2P55795 449 aaKnown RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TOB2Q14106 344 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 DNAJC21Q5F1R6 531 aaKnown RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 LARP1BQ659C4 914 aaKnown RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 BRINP3Q76B58 766 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 PLBD2Q8NHP8 589 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 CCDC85AQ96PX6 553 aaPredicted RBP6.07□□□□□ -1.44
CLDND1-208ENST00000503004 TSPY26PQ9H489 355 aa6.07□□□□□ -1.44
CLDND1-208ENST00000503004 STRCP1A6NGW2 1772 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 PPFIA3O75145 1194 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 HCLS1P14317 486 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 ATP5JP18859 108 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 IRF5Q13568 498 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 NOLC1Q14978 699 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 LRRC24Q50LG9 513 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 RNF20Q5VTR2 975 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 ICE2Q659A1 982 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 ZCRB1Q8TBF4 217 aaKnown RBP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 SYAP1Q96A49 352 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 SH2B1Q9NRF2 756 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 DDX41Q9UJV9 622 aaKnown RBP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 COL18A1P39060 1754 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 GOLIM4O00461 696 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 CYP21A2P08686 494 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 RPS6KB1P23443 525 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 PSMA5P28066 241 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 UBE2HP62256 183 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 FOXO4P98177 505 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 HSP90AB3PQ58FF7 597 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 GIMAP6Q6P9H5 292 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 TMEM87AQ8NBN3 555 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 ZSCAN31Q96LW9 406 aaPredicted RBP6.06□□□□□ -1.44
CLDND1-208ENST00000503004 SNRKQ9NRH2 765 aa6.06□□□□□ -1.44
CLDND1-208ENST00000503004 ZNF609O15014 1411 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 A0A0G2JLW4 131 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 JAK2O60674 1132 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 GUCY2CP25092 1073 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 NAA30Q147X3 362 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 TSGA10IPQ3SY00 556 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 ATG9AQ7Z3C6 839 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 CCDC125Q86Z20 511 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 GPATCH11Q8N954 259 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 SGSM3Q96HU1 749 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 PUS3Q9BZE2 481 aaKnown RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 TOMM22Q9NS69 142 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 USP25Q9UHP3 1055 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 ATP6V1DQ9Y5K8 247 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 MORC2Q9Y6X9 1032 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 LMTK3Q96Q04 1460 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 WDR17Q8IZU2 1322 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 H7C1W4 665 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 RIOK3O14730 519 aaKnown RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 ONECUT3O60422 494 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 CCDC183Q5T5S1 534 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 TTC6Q86TZ1 520 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 DDX11Q96FC9 970 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 CWC25Q9NXE8 425 aaPredicted RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 TFIP11Q9UBB9 837 aaKnown RBP6.05□□□□□ -1.44
CLDND1-208ENST00000503004 MRC1P22897 1456 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 PCDH11XQ9BZA7 1347 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 PCDH11YQ9BZA8 1340 aa6.05□□□□□ -1.44
CLDND1-208ENST00000503004 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
CLDND1-208ENST00000503004 RETREG2Q8NC44 543 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 PIBF1Q8WXW3 757 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 NEK1Q96PY6 1258 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 HAUS7Q99871 368 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 GOLGB1Q14789 3259 aaKnown RBP6.04□□□□□ -1.44
CLDND1-208ENST00000503004 KAT6BQ8WYB5 2073 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 CPDO75976 1380 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 NCBP1Q09161 790 aaKnown RBP6.04□□□□□ -1.44
CLDND1-208ENST00000503004 CAMK4Q16566 473 aa6.04□□□□□ -1.44
CLDND1-208ENST00000503004 MCMDC2Q4G0Z9 681 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms