RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KIAA0100Q14667 2235 aaKnown RBP20.29■□□□□ 0.84
HDAC6-236ENST00000498808 SASH1O94885 1247 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 LDLRAD1Q5T700 205 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 SPRYD7Q5W111 196 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 ARMC9Q7Z3E5 817 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 MYD88Q99836 296 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 PHAXQ9H814 394 aaKnown RBP20.29■□□□□ 0.84
HDAC6-236ENST00000498808 TRIM17Q9Y577 477 aa20.29■□□□□ 0.84
HDAC6-236ENST00000498808 RBBP6Q7Z6E9 1792 aaKnown RBP20.29■□□□□ 0.84
HDAC6-236ENST00000498808 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
HDAC6-236ENST00000498808 OTOP1Q7RTM1 612 aa20.28■□□□□ 0.84
HDAC6-236ENST00000498808 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
HDAC6-236ENST00000498808 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
HDAC6-236ENST00000498808 CCDC191Q8NCU4 936 aa20.28■□□□□ 0.84
HDAC6-236ENST00000498808 FZD1Q9UP38 647 aa20.27■□□□□ 0.84
HDAC6-236ENST00000498808 SPEF2Q9C093 1822 aa20.27■□□□□ 0.84
HDAC6-236ENST00000498808 MYO3BQ8WXR4 1341 aa20.27■□□□□ 0.83
HDAC6-236ENST00000498808 ALDH1A1P00352 501 aa20.26■□□□□ 0.83
HDAC6-236ENST00000498808 STRIP1Q5VSL9 837 aa20.26■□□□□ 0.83
HDAC6-236ENST00000498808 FBXW7Q969H0 707 aa20.26■□□□□ 0.83
HDAC6-236ENST00000498808 ANGEL1Q9UNK9 670 aaKnown RBP20.26■□□□□ 0.83
HDAC6-236ENST00000498808 INTS3Q68E01 1043 aaKnown RBP20.25■□□□□ 0.83
HDAC6-236ENST00000498808 APOBEC3FQ8IUX4 373 aaKnown RBP20.25■□□□□ 0.83
HDAC6-236ENST00000498808 CWC25Q9NXE8 425 aaPredicted RBP20.25■□□□□ 0.83
HDAC6-236ENST00000498808 MINPP1Q9UNW1 487 aa20.25■□□□□ 0.83
HDAC6-236ENST00000498808 CENPFP49454 3210 aa20.25■□□□□ 0.83
HDAC6-236ENST00000498808 LAMB1P07942 1786 aa20.25■□□□□ 0.83
HDAC6-236ENST00000498808 BRCA2P51587 3418 aa20.25■□□□□ 0.83
HDAC6-236ENST00000498808 TXNRD3Q86VQ6 643 aa20.24■□□□□ 0.83
HDAC6-236ENST00000498808 IFNL1Q8IU54 200 aa20.24■□□□□ 0.83
HDAC6-236ENST00000498808 ZBED3Q96IU2 234 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-236ENST00000498808 SSC5DA1L4H1 1573 aa20.23■□□□□ 0.83
HDAC6-236ENST00000498808 MANSC4A6NHS7 340 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-236ENST00000498808 IGF2BP3O00425 579 aaKnown RBP eCLIP20.23■□□□□ 0.83
HDAC6-236ENST00000498808 CCT4P50991 539 aaKnown RBP20.23■□□□□ 0.83
HDAC6-236ENST00000498808 FXR1P51114 621 aaKnown RBP eCLIP20.23■□□□□ 0.83
HDAC6-236ENST00000498808 CTSWP56202 376 aa20.23■□□□□ 0.83
HDAC6-236ENST00000498808 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
HDAC6-236ENST00000498808 COA1Q9GZY4 146 aa20.23■□□□□ 0.83
HDAC6-236ENST00000498808 MBIPQ9NS73 344 aa20.23■□□□□ 0.83
HDAC6-236ENST00000498808 BSDC1Q9NW68 430 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-236ENST00000498808 INHBEP58166 350 aa20.22■□□□□ 0.83
HDAC6-236ENST00000498808 KIAA0825Q8IV33 1275 aa20.22■□□□□ 0.83
HDAC6-236ENST00000498808 PTPN22Q9Y2R2 807 aa20.22■□□□□ 0.83
HDAC6-236ENST00000498808 MYH3P11055 1940 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 MMP14P50281 582 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 MAP3K11Q16584 847 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 TTLL11Q8NHH1 800 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 WNK4Q96J92 1243 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 CLMNQ96JQ2 1002 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 METTL22Q9BUU2 404 aaPredicted RBP20.21■□□□□ 0.83
HDAC6-236ENST00000498808 GREM2Q9H772 168 aa20.21■□□□□ 0.83
HDAC6-236ENST00000498808 COL1A1P02452 1464 aaPredicted RBP20.21■□□□□ 0.83
HDAC6-236ENST00000498808 ZBTB48P10074 688 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-236ENST00000498808 EN2P19622 333 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-236ENST00000498808 KLRK1P26718 216 aa20.2■□□□□ 0.82
HDAC6-236ENST00000498808 TTLL5Q6EMB2 1281 aa20.2■□□□□ 0.82
HDAC6-236ENST00000498808 CD99L2Q8TCZ2 262 aa20.2■□□□□ 0.82
HDAC6-236ENST00000498808 ARMC5Q96C12 935 aa20.2■□□□□ 0.82
HDAC6-236ENST00000498808 SLC10A4Q96EP9 437 aa20.2■□□□□ 0.82
HDAC6-236ENST00000498808 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.2■□□□□ 0.82
HDAC6-236ENST00000498808 CAP1Q01518 475 aa20.19■□□□□ 0.82
HDAC6-236ENST00000498808 ERO1AQ96HE7 468 aa20.19■□□□□ 0.82
HDAC6-236ENST00000498808 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
HDAC6-236ENST00000498808 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
HDAC6-236ENST00000498808 ZNF853P0CG23 659 aa20.18■□□□□ 0.82
HDAC6-236ENST00000498808 LEMD3Q9Y2U8 911 aa20.18■□□□□ 0.82
HDAC6-236ENST00000498808 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
HDAC6-236ENST00000498808 GTF2IP78347 998 aa20.17■□□□□ 0.82
HDAC6-236ENST00000498808 CRHR2Q13324 411 aa20.17■□□□□ 0.82
HDAC6-236ENST00000498808 RALBP1Q15311 655 aa20.17■□□□□ 0.82
HDAC6-236ENST00000498808 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
HDAC6-236ENST00000498808 GJA5P36382 358 aa20.16■□□□□ 0.82
HDAC6-236ENST00000498808 EFCC1Q9HA90 598 aa20.16■□□□□ 0.82
HDAC6-236ENST00000498808 MAP3K2Q9Y2U5 619 aa20.16■□□□□ 0.82
HDAC6-236ENST00000498808 PCDHAC2Q9Y5I4 1007 aa20.16■□□□□ 0.82
HDAC6-236ENST00000498808 PPP1R12BO60237 982 aaPredicted RBP20.15■□□□□ 0.82
HDAC6-236ENST00000498808 ZNF804BA4D1E1 1349 aa20.15■□□□□ 0.82
HDAC6-236ENST00000498808 DDX58O95786 925 aaKnown RBP20.14■□□□□ 0.81
HDAC6-236ENST00000498808 DLGAP5Q15398 846 aa20.14■□□□□ 0.81
HDAC6-236ENST00000498808 CERS5Q8N5B7 392 aa20.14■□□□□ 0.81
HDAC6-236ENST00000498808 PTPN18Q99952 460 aa20.14■□□□□ 0.81
HDAC6-236ENST00000498808 COLQQ9Y215 455 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-236ENST00000498808 PPP2R3BQ9Y5P8 575 aa20.14■□□□□ 0.81
HDAC6-236ENST00000498808 SP3Q02447 781 aa20.13■□□□□ 0.81
HDAC6-236ENST00000498808 MTMR14Q8NCE2 650 aa20.13■□□□□ 0.81
HDAC6-236ENST00000498808 AOX1Q06278 1338 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 UNCXA6NJT0 531 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 IGHMBP2P38935 993 aaKnown RBP20.12■□□□□ 0.81
HDAC6-236ENST00000498808 NBPF12Q5TAG4 269 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-236ENST00000498808 C8orf58Q8NAV2 365 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 ZNF333Q96JL9 665 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 CD209Q9NNX6 404 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 IFT57Q9NWB7 429 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 ADAMTS8Q9UP79 889 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 OTOFQ9HC10 1997 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 TRIOBPQ9H2D6 2365 aa20.12■□□□□ 0.81
HDAC6-236ENST00000498808 CLRN2A0PK11 232 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms