RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 NMRK2Q9NPI5 230 aa24.13■■□□□ 1.45
HDAC4-212ENST00000495497 G3BP1Q13283 466 aaKnown RBP eCLIP24.12■■□□□ 1.45
HDAC4-212ENST00000495497 RPAP2Q8IXW5 612 aaPredicted RBP24.12■■□□□ 1.45
HDAC4-212ENST00000495497 RRAGCQ9HB90 399 aa24.12■■□□□ 1.45
HDAC4-212ENST00000495497 CEP126Q9P2H0 1117 aa24.12■■□□□ 1.45
HDAC4-212ENST00000495497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.12■■□□□ 1.45
HDAC4-212ENST00000495497 KDM2BQ8NHM5 1336 aa24.11■■□□□ 1.45
HDAC4-212ENST00000495497 SURF6O75683 361 aaKnown RBP24.11■■□□□ 1.45
HDAC4-212ENST00000495497 TFCP2Q12800 502 aa24.11■■□□□ 1.45
HDAC4-212ENST00000495497 CIAPIN1Q6FI81 312 aa24.11■■□□□ 1.45
HDAC4-212ENST00000495497 C15orf52Q6ZUT6 534 aaKnown RBP24.11■■□□□ 1.45
HDAC4-212ENST00000495497 FGFR2P21802 821 aa24.1■■□□□ 1.45
HDAC4-212ENST00000495497 GYG1P46976 350 aa24.1■■□□□ 1.45
HDAC4-212ENST00000495497 PUM3Q15397 648 aaKnown RBP24.1■■□□□ 1.45
HDAC4-212ENST00000495497 COA1Q9GZY4 146 aa24.1■■□□□ 1.45
HDAC4-212ENST00000495497 PSMD14O00487 310 aa24.09■■□□□ 1.45
HDAC4-212ENST00000495497 SASH1O94885 1247 aa24.09■■□□□ 1.45
HDAC4-212ENST00000495497 IRX6P78412 446 aaPredicted RBP24.09■■□□□ 1.45
HDAC4-212ENST00000495497 GPC2Q8N158 579 aa24.09■■□□□ 1.45
HDAC4-212ENST00000495497 POTECB2RU33 542 aa24.08■■□□□ 1.45
HDAC4-212ENST00000495497 OS9Q13438 667 aaPredicted RBP24.08■■□□□ 1.45
HDAC4-212ENST00000495497 PODNQ7Z5L7 613 aa24.08■■□□□ 1.45
HDAC4-212ENST00000495497 FAM84BQ96KN1 310 aaPredicted RBP24.08■■□□□ 1.45
HDAC4-212ENST00000495497 CD209Q9NNX6 404 aa24.08■■□□□ 1.45
HDAC4-212ENST00000495497 TNIP1Q15025 636 aa24.07■■□□□ 1.44
HDAC4-212ENST00000495497 ATP2B3Q16720 1220 aa24.07■■□□□ 1.44
HDAC4-212ENST00000495497 ZNF804AQ7Z570 1209 aa24.07■■□□□ 1.44
HDAC4-212ENST00000495497 FBXW7Q969H0 707 aa24.07■■□□□ 1.44
HDAC4-212ENST00000495497 EXOC6BQ9Y2D4 811 aa24.07■■□□□ 1.44
HDAC4-212ENST00000495497 NOP58Q9Y2X3 529 aaKnown RBP24.07■■□□□ 1.44
HDAC4-212ENST00000495497 ZBTB12Q9Y330 459 aaPredicted RBP24.07■■□□□ 1.44
HDAC4-212ENST00000495497 IFIT1P09914 478 aaKnown RBP24.06■■□□□ 1.44
HDAC4-212ENST00000495497 SLC5A1P13866 664 aa24.06■■□□□ 1.44
HDAC4-212ENST00000495497 EXOC6Q8TAG9 804 aa24.06■■□□□ 1.44
HDAC4-212ENST00000495497 LPIN2Q92539 896 aa24.06■■□□□ 1.44
HDAC4-212ENST00000495497 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
HDAC4-212ENST00000495497 HIBADHP31937 336 aaKnown RBP24.05■■□□□ 1.44
HDAC4-212ENST00000495497 GMPSP49915 693 aaPredicted RBP24.05■■□□□ 1.44
HDAC4-212ENST00000495497 BCAMP50895 628 aa24.05■■□□□ 1.44
HDAC4-212ENST00000495497 TIMM10P62072 90 aa24.05■■□□□ 1.44
HDAC4-212ENST00000495497 L3MBTL3Q96JM7 780 aaPredicted RBP24.05■■□□□ 1.44
HDAC4-212ENST00000495497 KIF3CO14782 793 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 HMMRO75330 724 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 ADORA1P30542 326 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 SCNN1DP51172 638 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 FBXO33Q7Z6M2 555 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 MXD3Q9BW11 206 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 IQSEC3Q9UPP2 1182 aaPredicted RBP24.04■■□□□ 1.44
HDAC4-212ENST00000495497 JAG2Q9Y219 1238 aa24.04■■□□□ 1.44
HDAC4-212ENST00000495497 USP17L3A6NCW0 530 aa24.03■■□□□ 1.44
HDAC4-212ENST00000495497 USP17L4A6NCW7 530 aa24.03■■□□□ 1.44
HDAC4-212ENST00000495497 VIL1P09327 827 aaKnown RBP24.03■■□□□ 1.44
HDAC4-212ENST00000495497 IL1R1P14778 569 aa24.03■■□□□ 1.44
HDAC4-212ENST00000495497 GTF2IP78347 998 aa24.03■■□□□ 1.44
HDAC4-212ENST00000495497 USP17L1Q7RTZ2 530 aa24.03■■□□□ 1.44
HDAC4-212ENST00000495497 SCN9AQ15858 1988 aa24.03■■□□□ 1.44
HDAC4-212ENST00000495497 WDR90Q96KV7 1748 aa24.02■■□□□ 1.44
HDAC4-212ENST00000495497 A0A1B0GUL7 405 aa24.02■■□□□ 1.44
HDAC4-212ENST00000495497 APBB1O00213 710 aa24.02■■□□□ 1.44
HDAC4-212ENST00000495497 VEGFAP15692 232 aaPredicted RBP24.02■■□□□ 1.44
HDAC4-212ENST00000495497 CAVIN4Q5BKX8 364 aa24.02■■□□□ 1.44
HDAC4-212ENST00000495497 VPS37DQ86XT2 251 aa24.02■■□□□ 1.44
HDAC4-212ENST00000495497 SHTN1A0MZ66 631 aa24.01■■□□□ 1.43
HDAC4-212ENST00000495497 EPS15P42566 896 aa24.01■■□□□ 1.43
HDAC4-212ENST00000495497 TDRD7Q8NHU6 1098 aaKnown RBP24.01■■□□□ 1.43
HDAC4-212ENST00000495497 NEUROD6Q96NK8 337 aa24.01■■□□□ 1.43
HDAC4-212ENST00000495497 HACL1Q9UJ83 578 aa24.01■■□□□ 1.43
HDAC4-212ENST00000495497 AKAP2Q9Y2D5 859 aa24.01■■□□□ 1.43
HDAC4-212ENST00000495497 DACT2Q5SW24 774 aa24■■□□□ 1.43
HDAC4-212ENST00000495497 TTLL5Q6EMB2 1281 aa24■■□□□ 1.43
HDAC4-212ENST00000495497 RSBN1LQ6PCB5 846 aaPredicted RBP24■■□□□ 1.43
HDAC4-212ENST00000495497 STRIP1Q5VSL9 837 aa23.99■■□□□ 1.43
HDAC4-212ENST00000495497 XAGE2Q96GT9 111 aa23.99■■□□□ 1.43
HDAC4-212ENST00000495497 GPRC5DQ9NZD1 345 aa23.99■■□□□ 1.43
HDAC4-212ENST00000495497 LMOD1P29536 600 aaPredicted RBP23.98■■□□□ 1.43
HDAC4-212ENST00000495497 TNNI3KQ59H18 835 aa23.98■■□□□ 1.43
HDAC4-212ENST00000495497 TAF1DQ9H5J8 278 aaPredicted RBP23.98■■□□□ 1.43
HDAC4-212ENST00000495497 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
HDAC4-212ENST00000495497 FPGT-TNNI3KV9GXZ4 949 aa23.98■■□□□ 1.43
HDAC4-212ENST00000495497 ZNF609O15014 1411 aa23.98■■□□□ 1.43
HDAC4-212ENST00000495497 IQCA1LA6NCM1 817 aa23.97■■□□□ 1.43
HDAC4-212ENST00000495497 EPHX2P34913 555 aa23.97■■□□□ 1.43
HDAC4-212ENST00000495497 PHKA1P46020 1223 aa23.97■■□□□ 1.43
HDAC4-212ENST00000495497 CHAF1AQ13111 956 aaPredicted RBP23.97■■□□□ 1.43
HDAC4-212ENST00000495497 HSP90AB4PQ58FF6 505 aa23.97■■□□□ 1.43
HDAC4-212ENST00000495497 RHPN1Q8TCX5 695 aa23.97■■□□□ 1.43
HDAC4-212ENST00000495497 BCL11AQ9H165 835 aa23.97■■□□□ 1.43
HDAC4-212ENST00000495497 FRAT2O75474 233 aaPredicted RBP23.96■■□□□ 1.43
HDAC4-212ENST00000495497 POTEIP0CG38 1075 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 POTEJP0CG39 1038 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 CCDC102BQ68D86 513 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 ERC1Q8IUD2 1116 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 MICALL2Q8IY33 904 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 GMLQ99445 158 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 IL1RAPL2Q9NP60 686 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 GPR108Q9NPR9 543 aa23.96■■□□□ 1.43
HDAC4-212ENST00000495497 RPS12P25398 132 aaKnown RBP23.95■■□□□ 1.42
HDAC4-212ENST00000495497 C16orf71Q8IYS4 520 aaPredicted RBP23.95■■□□□ 1.42
HDAC4-212ENST00000495497 CERS5Q8N5B7 392 aa23.95■■□□□ 1.42
HDAC4-212ENST00000495497 AGBL3Q8NEM8 1001 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms