RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 PRPF40BQ6NWY9 871 aaKnown RBP9.88□□□□□ -0.83
RBM39-238ENST00000493853 SMC1BQ8NDV3 1235 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 NYXQ9GZU5 481 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 TAOK3Q9H2K8 898 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 ERVV-1B6SEH8 477 aa9.87□□□□□ -0.83
RBM39-238ENST00000493853 EIF2S2P20042 333 aaKnown RBP9.87□□□□□ -0.83
RBM39-238ENST00000493853 GUCA2AQ02747 115 aa9.87□□□□□ -0.83
RBM39-238ENST00000493853 LAPTM4AQ15012 233 aa9.87□□□□□ -0.83
RBM39-238ENST00000493853 WDR43Q15061 677 aaKnown RBP eCLIP9.87□□□□□ -0.83
RBM39-238ENST00000493853 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
RBM39-238ENST00000493853 HLFQ16534 295 aa9.87□□□□□ -0.83
RBM39-238ENST00000493853 PRDM9Q9NQV7 894 aa9.87□□□□□ -0.83
RBM39-238ENST00000493853 MSS51Q4VC12 460 aa9.86□□□□□ -0.83
RBM39-238ENST00000493853 CCDC93Q567U6 631 aa9.86□□□□□ -0.83
RBM39-238ENST00000493853 Q6ZNB5 142 aa9.86□□□□□ -0.83
RBM39-238ENST00000493853 LIAT1Q6ZQX7 453 aa9.86□□□□□ -0.83
RBM39-238ENST00000493853 PARP9Q8IXQ6 854 aa9.86□□□□□ -0.83
RBM39-238ENST00000493853 EMID1Q96A84 441 aaPredicted RBP9.86□□□□□ -0.83
RBM39-238ENST00000493853 KIAA1551Q9HCM1 1747 aa9.86□□□□□ -0.83
RBM39-238ENST00000493853 FCF1Q9Y324 198 aaKnown RBP9.86□□□□□ -0.83
RBM39-238ENST00000493853 GPTP24298 496 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 TMPOP42166 694 aaKnown RBP9.85□□□□□ -0.83
RBM39-238ENST00000493853 PRELPP51888 382 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 PLA2G2CQ5R387 149 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 SPRYD7Q5W111 196 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 TTLL7Q6ZT98 887 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 RTKN2Q8IZC4 609 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 RPGRQ92834 1020 aaKnown RBP9.85□□□□□ -0.83
RBM39-238ENST00000493853 USB1Q9BQ65 265 aaKnown RBP9.85□□□□□ -0.83
RBM39-238ENST00000493853 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
RBM39-238ENST00000493853 ZBTB3Q9H5J0 574 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
RBM39-238ENST00000493853 UBR2Q8IWV8 1755 aa9.85□□□□□ -0.83
RBM39-238ENST00000493853 MAP3K15Q6ZN16 1313 aa9.84□□□□□ -0.83
RBM39-238ENST00000493853 MYBBP1AQ9BQG0 1328 aaKnown RBP9.84□□□□□ -0.83
RBM39-238ENST00000493853 LTBP3Q9NS15 1303 aa9.84□□□□□ -0.83
RBM39-238ENST00000493853 KLRG2A4D1S0 409 aaPredicted RBP9.84□□□□□ -0.83
RBM39-238ENST00000493853 PPP1R42Q7Z4L9 355 aa9.84□□□□□ -0.83
RBM39-238ENST00000493853 CCDC146Q8IYE0 955 aa9.84□□□□□ -0.83
RBM39-238ENST00000493853 SPIRE2Q8WWL2 714 aa9.84□□□□□ -0.83
RBM39-238ENST00000493853 ERBB4Q15303 1308 aa9.83□□□□□ -0.84
RBM39-238ENST00000493853 PDE4DQ08499 809 aa9.83□□□□□ -0.84
RBM39-238ENST00000493853 TPRNQ4KMQ1 711 aa9.83□□□□□ -0.84
RBM39-238ENST00000493853 ZNF598Q86UK7 904 aaKnown RBP9.83□□□□□ -0.84
RBM39-238ENST00000493853 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
RBM39-238ENST00000493853 IQCA1LA6NCM1 817 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 DDNO94850 711 aaPredicted RBP9.82□□□□□ -0.84
RBM39-238ENST00000493853 FDX1P10109 184 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 HTRA3P83110 453 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 FKBP4Q02790 459 aaKnown RBP eCLIP9.82□□□□□ -0.84
RBM39-238ENST00000493853 AIMP1Q12904 312 aaKnown RBP9.82□□□□□ -0.84
RBM39-238ENST00000493853 PARP10Q53GL7 1025 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 ZNF697Q5TEC3 545 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 DNAJC5GQ8N7S2 189 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 JDP2Q8WYK2 163 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 RBM17Q96I25 401 aaKnown RBP9.82□□□□□ -0.84
RBM39-238ENST00000493853 NLRP3Q96P20 1036 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 ZNF277Q9NRM2 450 aaPredicted RBP9.82□□□□□ -0.84
RBM39-238ENST00000493853 CEP350Q5VT06 3117 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 ARFGEF1Q9Y6D6 1849 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 NRXN2Q9P2S2 1712 aa9.82□□□□□ -0.84
RBM39-238ENST00000493853 NRG2O14511 850 aaPredicted RBP9.81□□□□□ -0.84
RBM39-238ENST00000493853 TCERG1O14776 1098 aaKnown RBP9.81□□□□□ -0.84
RBM39-238ENST00000493853 NDUFV2P19404 249 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 HSP90AB3PQ58FF7 597 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 SUSD4Q5VX71 490 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 CC2D2BQ6DHV5 1058 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 ZNF34Q8IZ26 560 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 SYNE4Q8N205 404 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 SYMPKQ92797 1274 aaKnown RBP9.81□□□□□ -0.84
RBM39-238ENST00000493853 KLRG1Q96E93 195 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 UTP14AQ9BVJ6 771 aaKnown RBP9.81□□□□□ -0.84
RBM39-238ENST00000493853 ADAMTS8Q9UP79 889 aa9.81□□□□□ -0.84
RBM39-238ENST00000493853 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
RBM39-238ENST00000493853 AFDNP55196 1824 aaKnown RBP9.8□□□□□ -0.84
RBM39-238ENST00000493853 ZBTB24O43167 697 aaPredicted RBP9.8□□□□□ -0.84
RBM39-238ENST00000493853 ANXA1P04083 346 aa9.8□□□□□ -0.84
RBM39-238ENST00000493853 MS4A1P11836 297 aa9.8□□□□□ -0.84
RBM39-238ENST00000493853 OLFM4Q6UX06 510 aa9.8□□□□□ -0.84
RBM39-238ENST00000493853 COPS6Q7L5N1 327 aa9.8□□□□□ -0.84
RBM39-238ENST00000493853 BRCA1P38398 1863 aaKnown RBP9.8□□□□□ -0.84
RBM39-238ENST00000493853 SCN7AQ01118 1682 aa9.8□□□□□ -0.84
RBM39-238ENST00000493853 MOXD2PA6NHM9 499 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 POTECB2RU33 542 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 C6orf229H3BNL8 230 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 CHL1O00533 1208 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 IARSP41252 1262 aaKnown RBP9.79□□□□□ -0.84
RBM39-238ENST00000493853 RPIAP49247 311 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 MMP16P51512 607 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 EIF6P56537 245 aaKnown RBP9.79□□□□□ -0.84
RBM39-238ENST00000493853 DIXDC1Q155Q3 683 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 CRY2Q49AN0 593 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 EAPPQ56P03 285 aaPredicted RBP9.79□□□□□ -0.84
RBM39-238ENST00000493853 XAGE3Q8WTP9 111 aa9.79□□□□□ -0.84
RBM39-238ENST00000493853 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms