RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 TM4SF4P48230 202 aa18.03■□□□□ 0.48
VARS-227ENST00000489979 CTSWP56202 376 aa18.03■□□□□ 0.48
VARS-227ENST00000489979 DACT2Q5SW24 774 aa18.03■□□□□ 0.48
VARS-227ENST00000489979 FBXW7Q969H0 707 aa18.03■□□□□ 0.48
VARS-227ENST00000489979 IFT57Q9NWB7 429 aa18.03■□□□□ 0.48
VARS-227ENST00000489979 MYH3P11055 1940 aa18.02■□□□□ 0.48
VARS-227ENST00000489979 GPR25O00155 361 aa18.02■□□□□ 0.48
VARS-227ENST00000489979 WNT10BO00744 389 aa18.02■□□□□ 0.48
VARS-227ENST00000489979 DDX58O95786 925 aaKnown RBP18.02■□□□□ 0.48
VARS-227ENST00000489979 OGFOD1Q8N543 542 aa18.02■□□□□ 0.48
VARS-227ENST00000489979 MINPP1Q9UNW1 487 aa18.02■□□□□ 0.48
VARS-227ENST00000489979 NF2P35240 595 aa18.01■□□□□ 0.47
VARS-227ENST00000489979 GNAI1P63096 354 aa18.01■□□□□ 0.47
VARS-227ENST00000489979 C8orf58Q8NAV2 365 aa18.01■□□□□ 0.47
VARS-227ENST00000489979 TTLL11Q8NHH1 800 aa18.01■□□□□ 0.47
VARS-227ENST00000489979 GREM2Q9H772 168 aa18.01■□□□□ 0.47
VARS-227ENST00000489979 BSDC1Q9NW68 430 aaPredicted RBP18.01■□□□□ 0.47
VARS-227ENST00000489979 MAP3K2Q9Y2U5 619 aa18.01■□□□□ 0.47
VARS-227ENST00000489979 SASH1O94885 1247 aa18■□□□□ 0.47
VARS-227ENST00000489979 CCT4P50991 539 aaKnown RBP18■□□□□ 0.47
VARS-227ENST00000489979 PTPN12Q05209 780 aaKnown RBP18■□□□□ 0.47
VARS-227ENST00000489979 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
VARS-227ENST00000489979 NOM1Q5C9Z4 860 aaKnown RBP18■□□□□ 0.47
VARS-227ENST00000489979 STRIP1Q5VSL9 837 aa18■□□□□ 0.47
VARS-227ENST00000489979 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 APAF1O14727 1248 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 SREBF2Q12772 1141 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 PRKG1Q13976 671 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 CCDC30Q5VVM6 783 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 FBXO46Q6PJ61 603 aaPredicted RBP17.99■□□□□ 0.47
VARS-227ENST00000489979 TXNRD3Q86VQ6 643 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 COA1Q9GZY4 146 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 R3HDMLQ9H3Y0 253 aa17.99■□□□□ 0.47
VARS-227ENST00000489979 FKTNO75072 461 aa17.98■□□□□ 0.47
VARS-227ENST00000489979 CALD1Q05682 793 aaKnown RBP17.98■□□□□ 0.47
VARS-227ENST00000489979 ARMC9Q7Z3E5 817 aa17.98■□□□□ 0.47
VARS-227ENST00000489979 PI4KAP2A4QPH2 592 aa17.97■□□□□ 0.47
VARS-227ENST00000489979 TTLL5Q6EMB2 1281 aa17.97■□□□□ 0.47
VARS-227ENST00000489979 KSR2Q6VAB6 950 aa17.97■□□□□ 0.47
VARS-227ENST00000489979 PI4KAP1Q8N8J0 262 aa17.97■□□□□ 0.47
VARS-227ENST00000489979 LEMD3Q9Y2U8 911 aa17.97■□□□□ 0.47
VARS-227ENST00000489979 MMP14P50281 582 aa17.96■□□□□ 0.47
VARS-227ENST00000489979 CWF19L2Q2TBE0 894 aaKnown RBP17.96■□□□□ 0.47
VARS-227ENST00000489979 APOBEC3FQ8IUX4 373 aaKnown RBP17.96■□□□□ 0.47
VARS-227ENST00000489979 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
VARS-227ENST00000489979 TSPYL6Q8N831 410 aa17.96■□□□□ 0.47
VARS-227ENST00000489979 CFHR5Q9BXR6 569 aa17.96■□□□□ 0.47
VARS-227ENST00000489979 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
VARS-227ENST00000489979 ANGEL1Q9UNK9 670 aaKnown RBP17.96■□□□□ 0.47
VARS-227ENST00000489979 KLRK1P26718 216 aa17.95■□□□□ 0.46
VARS-227ENST00000489979 IGHMBP2P38935 993 aaKnown RBP17.95■□□□□ 0.46
VARS-227ENST00000489979 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
VARS-227ENST00000489979 LDLRAD1Q5T700 205 aa17.95■□□□□ 0.46
VARS-227ENST00000489979 SPRYD7Q5W111 196 aa17.95■□□□□ 0.46
VARS-227ENST00000489979 FZD1Q9UP38 647 aa17.95■□□□□ 0.46
VARS-227ENST00000489979 ZNF804BA4D1E1 1349 aa17.95■□□□□ 0.46
VARS-227ENST00000489979 GTF2IP78347 998 aa17.94■□□□□ 0.46
VARS-227ENST00000489979 ZBED3Q96IU2 234 aaPredicted RBP17.94■□□□□ 0.46
VARS-227ENST00000489979 NEURL1BA8MQ27 555 aa17.93■□□□□ 0.46
VARS-227ENST00000489979 H7C1W4 665 aa17.93■□□□□ 0.46
VARS-227ENST00000489979 UBE3BQ7Z3V4 1068 aa17.93■□□□□ 0.46
VARS-227ENST00000489979 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
VARS-227ENST00000489979 ALDH1A1P00352 501 aa17.92■□□□□ 0.46
VARS-227ENST00000489979 ITGA6P23229 1130 aa17.92■□□□□ 0.46
VARS-227ENST00000489979 SLC10A4Q96EP9 437 aa17.92■□□□□ 0.46
VARS-227ENST00000489979 ANKRD2Q9GZV1 360 aa17.92■□□□□ 0.46
VARS-227ENST00000489979 DEFB129Q9H1M3 183 aa17.92■□□□□ 0.46
VARS-227ENST00000489979 MANSC4A6NHS7 340 aaPredicted RBP17.91■□□□□ 0.46
VARS-227ENST00000489979 KCNJ4P48050 445 aa17.91■□□□□ 0.46
VARS-227ENST00000489979 IFNL1Q8IU54 200 aa17.91■□□□□ 0.46
VARS-227ENST00000489979 MPHOSPH8Q99549 860 aa17.91■□□□□ 0.46
VARS-227ENST00000489979 STK31Q9BXU1 1019 aa17.91■□□□□ 0.46
VARS-227ENST00000489979 TRIM17Q9Y577 477 aa17.91■□□□□ 0.46
VARS-227ENST00000489979 COL1A1P02452 1464 aaPredicted RBP17.9■□□□□ 0.46
VARS-227ENST00000489979 INHBEP58166 350 aa17.9■□□□□ 0.46
VARS-227ENST00000489979 DLGAP5Q15398 846 aa17.9■□□□□ 0.46
VARS-227ENST00000489979 G2E3Q7L622 706 aa17.9■□□□□ 0.46
VARS-227ENST00000489979 TSR2Q969E8 191 aaKnown RBP17.9■□□□□ 0.46
VARS-227ENST00000489979 PLA2G12BQ9BX93 195 aa17.9■□□□□ 0.46
VARS-227ENST00000489979 CD209Q9NNX6 404 aa17.9■□□□□ 0.46
VARS-227ENST00000489979 HTTP42858 3142 aa17.89■□□□□ 0.45
VARS-227ENST00000489979 CHRNDQ07001 517 aa17.89■□□□□ 0.45
VARS-227ENST00000489979 MAP3K11Q16584 847 aa17.89■□□□□ 0.45
VARS-227ENST00000489979 OTOP1Q7RTM1 612 aa17.89■□□□□ 0.45
VARS-227ENST00000489979 WNK4Q96J92 1243 aa17.89■□□□□ 0.45
VARS-227ENST00000489979 CLMNQ96JQ2 1002 aa17.89■□□□□ 0.45
VARS-227ENST00000489979 MKI67P46013 3256 aaKnown RBP17.89■□□□□ 0.45
VARS-227ENST00000489979 ECM29Q5VYK3 1845 aa17.88■□□□□ 0.45
VARS-227ENST00000489979 SSC5DA1L4H1 1573 aa17.88■□□□□ 0.45
VARS-227ENST00000489979 SNAP23O00161 211 aa17.88■□□□□ 0.45
VARS-227ENST00000489979 IGF2BP3O00425 579 aaKnown RBP eCLIP17.88■□□□□ 0.45
VARS-227ENST00000489979 PPP1R12BO60237 982 aaPredicted RBP17.88■□□□□ 0.45
VARS-227ENST00000489979 ZBTB48P10074 688 aaPredicted RBP17.88■□□□□ 0.45
VARS-227ENST00000489979 GCKRQ14397 625 aa17.88■□□□□ 0.45
VARS-227ENST00000489979 CERS5Q8N5B7 392 aa17.88■□□□□ 0.45
VARS-227ENST00000489979 PRKRIP1Q9H875 184 aaPredicted RBP17.88■□□□□ 0.45
VARS-227ENST00000489979 PCDHAC2Q9Y5I4 1007 aa17.88■□□□□ 0.45
VARS-227ENST00000489979 CENPFP49454 3210 aa17.87■□□□□ 0.45
VARS-227ENST00000489979 POTEFA5A3E0 1075 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms