RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PUM3Q15397 648 aaKnown RBP17.88■□□□□ 0.45
HLA-F-229ENST00000489502 DCAF8Q5TAQ9 597 aa17.88■□□□□ 0.45
HLA-F-229ENST00000489502 NMRK2Q9NPI5 230 aa17.88■□□□□ 0.45
HLA-F-229ENST00000489502 GJA3Q9Y6H8 435 aa17.88■□□□□ 0.45
HLA-F-229ENST00000489502 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.88■□□□□ 0.45
HLA-F-229ENST00000489502 CXCL9Q07325 125 aa17.87■□□□□ 0.45
HLA-F-229ENST00000489502 TFCP2Q12800 502 aa17.87■□□□□ 0.45
HLA-F-229ENST00000489502 OS9Q13438 667 aaPredicted RBP17.87■□□□□ 0.45
HLA-F-229ENST00000489502 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
HLA-F-229ENST00000489502 KCNQ5Q9NR82 932 aa17.87■□□□□ 0.45
HLA-F-229ENST00000489502 CEP126Q9P2H0 1117 aa17.87■□□□□ 0.45
HLA-F-229ENST00000489502 KDM2BQ8NHM5 1336 aa17.87■□□□□ 0.45
HLA-F-229ENST00000489502 ZNF609O15014 1411 aa17.87■□□□□ 0.45
HLA-F-229ENST00000489502 SURF6O75683 361 aaKnown RBP17.86■□□□□ 0.45
HLA-F-229ENST00000489502 FGFR2P21802 821 aa17.86■□□□□ 0.45
HLA-F-229ENST00000489502 GYG1P46976 350 aa17.86■□□□□ 0.45
HLA-F-229ENST00000489502 G3BP1Q13283 466 aaKnown RBP eCLIP17.86■□□□□ 0.45
HLA-F-229ENST00000489502 ATP2B3Q16720 1220 aa17.86■□□□□ 0.45
HLA-F-229ENST00000489502 CIAPIN1Q6FI81 312 aa17.86■□□□□ 0.45
HLA-F-229ENST00000489502 DPY19L2Q6NUT2 758 aa17.86■□□□□ 0.45
HLA-F-229ENST00000489502 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
HLA-F-229ENST00000489502 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
HLA-F-229ENST00000489502 C15orf52Q6ZUT6 534 aaKnown RBP17.85■□□□□ 0.45
HLA-F-229ENST00000489502 ZNF804AQ7Z570 1209 aa17.85■□□□□ 0.45
HLA-F-229ENST00000489502 EXOC6Q8TAG9 804 aa17.85■□□□□ 0.45
HLA-F-229ENST00000489502 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 PSMD14O00487 310 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 HMMRO75330 724 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 SASH1O94885 1247 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 SLC5A1P13866 664 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 GPC2Q8N158 579 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 FBXW7Q969H0 707 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 COA1Q9GZY4 146 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 PCDHB15Q9Y5E8 787 aa17.84■□□□□ 0.45
HLA-F-229ENST00000489502 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
HLA-F-229ENST00000489502 ADORA1P30542 326 aa17.83■□□□□ 0.44
HLA-F-229ENST00000489502 LPIN2Q92539 896 aa17.83■□□□□ 0.44
HLA-F-229ENST00000489502 CD209Q9NNX6 404 aa17.83■□□□□ 0.44
HLA-F-229ENST00000489502 NOP58Q9Y2X3 529 aaKnown RBP17.83■□□□□ 0.44
HLA-F-229ENST00000489502 SCN4AP35499 1836 aa17.83■□□□□ 0.44
HLA-F-229ENST00000489502 APBB1O00213 710 aa17.82■□□□□ 0.44
HLA-F-229ENST00000489502 GMPSP49915 693 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-229ENST00000489502 PODNQ7Z5L7 613 aa17.82■□□□□ 0.44
HLA-F-229ENST00000489502 L3MBTL3Q96JM7 780 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-229ENST00000489502 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-229ENST00000489502 RRAGCQ9HB90 399 aa17.82■□□□□ 0.44
HLA-F-229ENST00000489502 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-229ENST00000489502 JAG2Q9Y219 1238 aa17.82■□□□□ 0.44
HLA-F-229ENST00000489502 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-229ENST00000489502 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
HLA-F-229ENST00000489502 A0A1B0GUL7 405 aa17.81■□□□□ 0.44
HLA-F-229ENST00000489502 HIBADHP31937 336 aaKnown RBP17.81■□□□□ 0.44
HLA-F-229ENST00000489502 BCAMP50895 628 aa17.81■□□□□ 0.44
HLA-F-229ENST00000489502 SCNN1DP51172 638 aa17.81■□□□□ 0.44
HLA-F-229ENST00000489502 TNIP1Q15025 636 aa17.81■□□□□ 0.44
HLA-F-229ENST00000489502 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
HLA-F-229ENST00000489502 MXD3Q9BW11 206 aa17.81■□□□□ 0.44
HLA-F-229ENST00000489502 SHTN1A0MZ66 631 aa17.8■□□□□ 0.44
HLA-F-229ENST00000489502 POTECB2RU33 542 aa17.8■□□□□ 0.44
HLA-F-229ENST00000489502 FBXO33Q7Z6M2 555 aa17.8■□□□□ 0.44
HLA-F-229ENST00000489502 USP17L3A6NCW0 530 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 USP17L4A6NCW7 530 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 KIF3CO14782 793 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 IL1R1P14778 569 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 TIMM10P62072 90 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 GTF2IP78347 998 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 USP17L1Q7RTZ2 530 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 AKAP2Q9Y2D5 859 aa17.79■□□□□ 0.44
HLA-F-229ENST00000489502 PHKA1P46020 1223 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 DACT2Q5SW24 774 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 RSBN1LQ6PCB5 846 aaPredicted RBP17.78■□□□□ 0.44
HLA-F-229ENST00000489502 TDRD7Q8NHU6 1098 aaKnown RBP17.78■□□□□ 0.44
HLA-F-229ENST00000489502 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 BCL11AQ9H165 835 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 IL1RAPL2Q9NP60 686 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 HACL1Q9UJ83 578 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
HLA-F-229ENST00000489502 VIL1P09327 827 aaKnown RBP17.77■□□□□ 0.44
HLA-F-229ENST00000489502 VEGFAP15692 232 aaPredicted RBP17.77■□□□□ 0.44
HLA-F-229ENST00000489502 LMOD1P29536 600 aaPredicted RBP17.77■□□□□ 0.44
HLA-F-229ENST00000489502 EPS15P42566 896 aa17.77■□□□□ 0.44
HLA-F-229ENST00000489502 CHAF1AQ13111 956 aaPredicted RBP17.77■□□□□ 0.44
HLA-F-229ENST00000489502 HSP90AB4PQ58FF6 505 aa17.77■□□□□ 0.44
HLA-F-229ENST00000489502 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
HLA-F-229ENST00000489502 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.44
HLA-F-229ENST00000489502 XAGE2Q96GT9 111 aa17.77■□□□□ 0.44
HLA-F-229ENST00000489502 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
HLA-F-229ENST00000489502 GPRC5DQ9NZD1 345 aa17.77■□□□□ 0.44
HLA-F-229ENST00000489502 IQCA1LA6NCM1 817 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 TTLL5Q6EMB2 1281 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 MICALL2Q8IY33 904 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 CERS5Q8N5B7 392 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 TAF1DQ9H5J8 278 aaPredicted RBP17.76■□□□□ 0.43
HLA-F-229ENST00000489502 ADAMTSL1Q8N6G6 1762 aa17.76■□□□□ 0.43
HLA-F-229ENST00000489502 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
HLA-F-229ENST00000489502 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms