RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 RNF20Q5VTR2 975 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 SMAP1Q8IYB5 467 aaPredicted RBP5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 INTS4Q96HW7 963 aaKnown RBP5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 C1orf115Q9H7X2 142 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 MBIPQ9NS73 344 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 TMEM63CQ9P1W3 806 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 POLKQ9UBT6 870 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 ZDHHC9Q9Y397 364 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 PCDHB11Q9Y5F2 797 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 SPATA31D1Q6ZQQ2 1576 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 RGPD1P0DJD0 1748 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 PTPRCP08575 1304 aa5.7□□□□□ -1.5
SMARCC1-206ENST00000485737 MSH6P52701 1360 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 ITSN1Q15811 1721 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 RICTORQ6R327 1708 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 ERC2O15083 957 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 SPINT1O43278 529 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 LILRA1O75019 489 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 GTF2F1P35269 517 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 ADD1P35611 737 aaKnown RBP5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 CTSOP43234 321 aaPredicted RBP5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 ANAPC15P60006 121 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 VAC14Q08AM6 782 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 PKP1Q13835 747 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 MCM6Q14566 821 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.69□□□□□ -1.54e-18■■□□□ 12.2
SMARCC1-206ENST00000485737 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 TSPYL6Q8N831 410 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 FAM184AQ8NB25 1140 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 TMEM87AQ8NBN3 555 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 LRRC37A3O60309 1634 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 SALL3Q9BXA9 1300 aa5.69□□□□□ -1.5
SMARCC1-206ENST00000485737 NALCNQ8IZF0 1738 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 AKAP12Q02952 1782 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 TECPR2O15040 1411 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 H3BM21 787 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 PRPF40AO75400 957 aaKnown RBP5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 SDSP20132 328 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 KIAA2012Q0VF49 1180 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 UVSSAQ2YD98 709 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 ZGPATQ8N5A5 531 aaKnown RBP5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 MYRIPQ8NFW9 859 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 SYAP1Q96A49 352 aaPredicted RBP5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 PHACTR3Q96KR7 559 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 PRIMPOLQ96LW4 560 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 PRAM1Q96QH2 718 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 TSPY26PQ9H489 355 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 R3HCC1Q9Y3T6 440 aaKnown RBP5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 MYO5BQ9ULV0 1848 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 PXDNLA1KZ92 1463 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 AOX1Q06278 1338 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 CPS1P31327 1500 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 CRYBG1Q9Y4K1 1723 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 DLG5Q8TDM6 1919 aa5.68□□□□□ -1.5
SMARCC1-206ENST00000485737 NRXN3Q9Y4C0 1643 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 FAM208AQ9UK61 1670 aaKnown RBP5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 SYCE3A1L190 88 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 ATP5J2-PTCD1G3V325 749 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 PTGIRP43119 386 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 HMGN5P82970 282 aaKnown RBP5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 XPCQ01831 940 aaPredicted RBP5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 IRF5Q13568 498 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 UTP14CQ5TAP6 766 aaKnown RBP5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 CC2D2BQ6DHV5 1058 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 C8orf58Q8NAV2 365 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 PIBF1Q8WXW3 757 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 TMX3Q96JJ7 454 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 CDK19Q9BWU1 502 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 SPTLC3Q9NUV7 552 aa5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 RPAP1Q9BWH6 1393 aaPredicted RBP5.67□□□□□ -1.5
SMARCC1-206ENST00000485737 CRB1P82279 1406 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 TOPAZ1Q8N9V7 1692 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 AGLP35573 1532 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 MEN1O00255 615 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 HMMRO75330 724 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 IGHA1P01876 353 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 VSIG8P0DPA2 414 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 MCCP23508 829 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 SCTRP47872 440 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 PTSQ03393 145 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 IDI1Q13907 227 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 SLFNL1Q499Z3 407 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 LCE2CQ5TA81 110 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 CCDC125Q86Z20 511 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 OTUD7AQ8TE49 926 aaPredicted RBP5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 THUMPD2Q9BTF0 503 aaKnown RBP5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 CCDC94Q9BW85 323 aaPredicted RBP5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 CEP126Q9P2H0 1117 aa5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMARCC1-206ENST00000485737 OVOS2A0A0J9YW53 1432 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 OVOS2Q6IE36 1432 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 XRN1Q8IZH2 1706 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 A2ML1A8K2U0 1454 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 CHL1O00533 1208 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 PPFIA3O75145 1194 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 LETM1O95202 739 aaPredicted RBP5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 NCLP19338 710 aaKnown RBP5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 GMPRP36959 345 aa5.65□□□□□ -1.5
SMARCC1-206ENST00000485737 PDE1AP54750 535 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms