RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 PLA2G12BQ9BX93 195 aa9.88□□□□□ -0.83
CCNC-204ENST00000482541 BSDC1Q9NW68 430 aaPredicted RBP9.88□□□□□ -0.83
CCNC-204ENST00000482541 CNOT7Q9UIV1 285 aaKnown RBP9.88□□□□□ -0.83
CCNC-204ENST00000482541 GGA1Q9UJY5 639 aa9.88□□□□□ -0.83
CCNC-204ENST00000482541 RTL9Q8NET4 1388 aa9.88□□□□□ -0.83
CCNC-204ENST00000482541 G3V3G9 751 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 H7C1D1 291 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
CCNC-204ENST00000482541 DBNDD1Q9H9R9 158 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 COL4A1P02462 1669 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 XDHP47989 1333 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 ZNF521Q96K83 1311 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 MYH3P11055 1940 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 CNTNAP1P78357 1384 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 PSMD14O00487 310 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 ECE2O60344 883 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 UFL1O94874 794 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 ATP2B4P23634 1241 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 RPS12P25398 132 aaKnown RBP9.87□□□□□ -0.83
CCNC-204ENST00000482541 DEFB115Q30KQ5 88 aa9.87□□□□□ -0.83
CCNC-204ENST00000482541 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
CCNC-204ENST00000482541 CSF1RP07333 972 aa9.86□□□□□ -0.83
CCNC-204ENST00000482541 VIL1P09327 827 aaKnown RBP9.86□□□□□ -0.83
CCNC-204ENST00000482541 CASP7P55210 303 aa9.86□□□□□ -0.83
CCNC-204ENST00000482541 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
CCNC-204ENST00000482541 GREM2Q9H772 168 aa9.86□□□□□ -0.83
CCNC-204ENST00000482541 MINPP1Q9UNW1 487 aa9.86□□□□□ -0.83
CCNC-204ENST00000482541 RASSF10A6NK89 507 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 TIE1P35590 1138 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 IGHMBP2P38935 993 aaKnown RBP9.85□□□□□ -0.83
CCNC-204ENST00000482541 HIRAP54198 1017 aaPredicted RBP9.85□□□□□ -0.83
CCNC-204ENST00000482541 BEND3Q5T5X7 828 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 CDC37L1Q7L3B6 337 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 PODNQ7Z5L7 613 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 MICALL2Q8IY33 904 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 HSPA1AP0DMV8 641 aaKnown RBP9.85□□□□□ -0.83
CCNC-204ENST00000482541 HSPA1BP0DMV9 641 aaKnown RBP9.85□□□□□ -0.83
CCNC-204ENST00000482541 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
CCNC-204ENST00000482541 CST9Q5W186 159 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 KCNQ5Q9NR82 932 aa9.85□□□□□ -0.83
CCNC-204ENST00000482541 TTLL13PA6NNM8 815 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 F6X3S4 739 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 ITGA6P23229 1130 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 VEGFBP49765 207 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 CCT4P50991 539 aaKnown RBP9.84□□□□□ -0.83
CCNC-204ENST00000482541 AGBL3Q8NEM8 1001 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 GPR101Q96P66 508 aaPredicted RBP9.84□□□□□ -0.83
CCNC-204ENST00000482541 MPHOSPH8Q99549 860 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 ANKRD2Q9GZV1 360 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 ABT1Q9ULW3 272 aaKnown RBP9.84□□□□□ -0.83
CCNC-204ENST00000482541 LEMD3Q9Y2U8 911 aa9.84□□□□□ -0.83
CCNC-204ENST00000482541 TRPM7Q96QT4 1865 aa9.83□□□□□ -0.84
CCNC-204ENST00000482541 ANKRD18BA2A2Z9 1011 aa9.83□□□□□ -0.84
CCNC-204ENST00000482541 E9PSI1 815 aa9.83□□□□□ -0.84
CCNC-204ENST00000482541 TRAF5O00463 557 aa9.83□□□□□ -0.84
CCNC-204ENST00000482541 ALDH1L1O75891 902 aa9.83□□□□□ -0.84
CCNC-204ENST00000482541 SAMD7Q7Z3H4 446 aa9.83□□□□□ -0.84
CCNC-204ENST00000482541 SHTN1A0MZ66 631 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 USP17L3A6NCW0 530 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 USP17L4A6NCW7 530 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 GRM8O00222 908 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 ECE1P42892 770 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 FOXO4P98177 505 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 FMR1Q06787 632 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCNC-204ENST00000482541 IFIT5Q13325 482 aaKnown RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 USP17L1Q7RTZ2 530 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 TRPM4Q8TD43 1214 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 BMP2KQ9NSY1 1161 aaPredicted RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 MED23Q9ULK4 1368 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 ZNF609O15014 1411 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 CCER2I3L3R5 266 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 GALR2O43603 387 aaPredicted RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 SLFN5Q08AF3 891 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 COL13A1Q5TAT6 717 aaPredicted RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 RSBN1LQ6PCB5 846 aaPredicted RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 DCPSQ96C86 337 aaKnown RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 HHIPL1Q96JK4 782 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 GLIS2Q9BZE0 524 aaPredicted RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 SRCIN1Q9C0H9 1055 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 COA1Q9GZY4 146 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 SCN9AQ15858 1988 aa9.82□□□□□ -0.84
CCNC-204ENST00000482541 WDR33Q9C0J8 1336 aaKnown RBP9.82□□□□□ -0.84
CCNC-204ENST00000482541 WTIPA6NIX2 430 aaPredicted RBP9.81□□□□□ -0.84
CCNC-204ENST00000482541 CELF2O95319 508 aaKnown RBP9.81□□□□□ -0.84
CCNC-204ENST00000482541 MMP14P50281 582 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 ZNF280AP59817 542 aaPredicted RBP9.81□□□□□ -0.84
CCNC-204ENST00000482541 MAP2K1Q02750 393 aaPredicted RBP9.81□□□□□ -0.84
CCNC-204ENST00000482541 KIF4BQ2VIQ3 1234 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 TBC1D10BQ4KMP7 808 aaPredicted RBP9.81□□□□□ -0.84
CCNC-204ENST00000482541 RBM26Q5T8P6 1007 aaKnown RBP9.81□□□□□ -0.84
CCNC-204ENST00000482541 SLC4A10Q6U841 1118 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 SAPCD2Q86UD0 394 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 GMLQ99445 158 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 WBP1LQ9NX94 342 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 ZNF804BA4D1E1 1349 aa9.81□□□□□ -0.84
CCNC-204ENST00000482541 PSME4Q14997 1843 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms