RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
NDC1-202ENST00000480952 SPRYD7Q5W111 196 aa17.32■□□□□ 0.36
NDC1-202ENST00000480952 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
NDC1-202ENST00000480952 CWC25Q9NXE8 425 aaPredicted RBP17.32■□□□□ 0.36
NDC1-202ENST00000480952 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
NDC1-202ENST00000480952 TRIM17Q9Y577 477 aa17.32■□□□□ 0.36
NDC1-202ENST00000480952 MYO3BQ8WXR4 1341 aa17.31■□□□□ 0.36
NDC1-202ENST00000480952 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
NDC1-202ENST00000480952 SASH1O94885 1247 aa17.31■□□□□ 0.36
NDC1-202ENST00000480952 CDC5LQ99459 802 aaKnown RBP17.31■□□□□ 0.36
NDC1-202ENST00000480952 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
NDC1-202ENST00000480952 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.31■□□□□ 0.36
NDC1-202ENST00000480952 ANGEL1Q9UNK9 670 aaKnown RBP17.31■□□□□ 0.36
NDC1-202ENST00000480952 MMP14P50281 582 aa17.3■□□□□ 0.36
NDC1-202ENST00000480952 INHBEP58166 350 aa17.3■□□□□ 0.36
NDC1-202ENST00000480952 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
NDC1-202ENST00000480952 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
NDC1-202ENST00000480952 APOBEC3FQ8IUX4 373 aaKnown RBP17.3■□□□□ 0.36
NDC1-202ENST00000480952 SLC10A4Q96EP9 437 aa17.3■□□□□ 0.36
NDC1-202ENST00000480952 MED23Q9ULK4 1368 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 POTEFA5A3E0 1075 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 MANSC4A6NHS7 340 aaPredicted RBP17.29■□□□□ 0.36
NDC1-202ENST00000480952 OTOP1Q7RTM1 612 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 COA1Q9GZY4 146 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
NDC1-202ENST00000480952 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
NDC1-202ENST00000480952 RALBP1Q15311 655 aa17.28■□□□□ 0.36
NDC1-202ENST00000480952 TTLL5Q6EMB2 1281 aa17.28■□□□□ 0.36
NDC1-202ENST00000480952 MBIPQ9NS73 344 aa17.28■□□□□ 0.36
NDC1-202ENST00000480952 BSDC1Q9NW68 430 aaPredicted RBP17.28■□□□□ 0.36
NDC1-202ENST00000480952 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
NDC1-202ENST00000480952 CTSWP56202 376 aa17.27■□□□□ 0.36
NDC1-202ENST00000480952 KIAA0825Q8IV33 1275 aa17.27■□□□□ 0.36
NDC1-202ENST00000480952 METTL22Q9BUU2 404 aaPredicted RBP17.27■□□□□ 0.36
NDC1-202ENST00000480952 FZD1Q9UP38 647 aa17.27■□□□□ 0.36
NDC1-202ENST00000480952 DDX58O95786 925 aaKnown RBP17.26■□□□□ 0.35
NDC1-202ENST00000480952 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
NDC1-202ENST00000480952 DEFB129Q9H1M3 183 aa17.26■□□□□ 0.35
NDC1-202ENST00000480952 ZBTB48P10074 688 aaPredicted RBP17.25■□□□□ 0.35
NDC1-202ENST00000480952 WDR43Q15061 677 aaKnown RBP eCLIP17.25■□□□□ 0.35
NDC1-202ENST00000480952 TXNRD3Q86VQ6 643 aa17.25■□□□□ 0.35
NDC1-202ENST00000480952 TTLL11Q8NHH1 800 aa17.25■□□□□ 0.35
NDC1-202ENST00000480952 GREM2Q9H772 168 aa17.25■□□□□ 0.35
NDC1-202ENST00000480952 PTPN22Q9Y2R2 807 aa17.25■□□□□ 0.35
NDC1-202ENST00000480952 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
NDC1-202ENST00000480952 MKI67P46013 3256 aaKnown RBP17.25■□□□□ 0.35
NDC1-202ENST00000480952 PPP1R12BO60237 982 aaPredicted RBP17.24■□□□□ 0.35
NDC1-202ENST00000480952 GTF2IP78347 998 aa17.24■□□□□ 0.35
NDC1-202ENST00000480952 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
NDC1-202ENST00000480952 WNK4Q96J92 1243 aa17.24■□□□□ 0.35
NDC1-202ENST00000480952 PSME4Q14997 1843 aa17.24■□□□□ 0.35
NDC1-202ENST00000480952 IGF2BP3O00425 579 aaKnown RBP eCLIP17.23■□□□□ 0.35
NDC1-202ENST00000480952 EN2P19622 333 aaPredicted RBP17.23■□□□□ 0.35
NDC1-202ENST00000480952 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
NDC1-202ENST00000480952 DLGAP5Q15398 846 aa17.23■□□□□ 0.35
NDC1-202ENST00000480952 CD99L2Q8TCZ2 262 aa17.23■□□□□ 0.35
NDC1-202ENST00000480952 CLMNQ96JQ2 1002 aa17.23■□□□□ 0.35
NDC1-202ENST00000480952 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
NDC1-202ENST00000480952 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
NDC1-202ENST00000480952 ZNF804BA4D1E1 1349 aa17.22■□□□□ 0.35
NDC1-202ENST00000480952 MAP3K11Q16584 847 aa17.22■□□□□ 0.35
NDC1-202ENST00000480952 SUPT20HL1Q3ZLR7 823 aa17.22■□□□□ 0.35
NDC1-202ENST00000480952 ZBED3Q96IU2 234 aaPredicted RBP17.22■□□□□ 0.35
NDC1-202ENST00000480952 ANKRD2Q9GZV1 360 aa17.22■□□□□ 0.35
NDC1-202ENST00000480952 UNCXA6NJT0 531 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 KCNJ4P48050 445 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
NDC1-202ENST00000480952 CRHR2Q13324 411 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 ARMC5Q96C12 935 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 TMEM106CQ9BVX2 250 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 PPP2R3BQ9Y5P8 575 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 HTTP42858 3142 aa17.21■□□□□ 0.35
NDC1-202ENST00000480952 MYO1BO43795 1136 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 KLRK1P26718 216 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 SP3Q02447 781 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 KSR2Q6VAB6 950 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 IFT57Q9NWB7 429 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
NDC1-202ENST00000480952 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
NDC1-202ENST00000480952 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
NDC1-202ENST00000480952 IGKV5-2P06315 115 aa17.19■□□□□ 0.34
NDC1-202ENST00000480952 IREB2P48200 963 aaKnown RBP17.19■□□□□ 0.34
NDC1-202ENST00000480952 GNAI1P63096 354 aa17.19■□□□□ 0.34
NDC1-202ENST00000480952 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
NDC1-202ENST00000480952 C8orf58Q8NAV2 365 aa17.19■□□□□ 0.34
NDC1-202ENST00000480952 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
NDC1-202ENST00000480952 CENPFP49454 3210 aa17.18■□□□□ 0.34
NDC1-202ENST00000480952 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
NDC1-202ENST00000480952 MTMR14Q8NCE2 650 aa17.18■□□□□ 0.34
NDC1-202ENST00000480952 CD209Q9NNX6 404 aa17.18■□□□□ 0.34
NDC1-202ENST00000480952 MYBBP1AQ9BQG0 1328 aaKnown RBP17.18■□□□□ 0.34
NDC1-202ENST00000480952 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
NDC1-202ENST00000480952 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
NDC1-202ENST00000480952 ITGA6P23229 1130 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms