RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 PTF1AQ7RTS3 328 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 AEBP1Q8IUX7 1158 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 ZNF592Q92610 1267 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 MTFR1LQ9H019 292 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 PRKRIP1Q9H875 184 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-213ENST00000480102 LRRC4BQ9NT99 713 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 STK32BQ9NY57 414 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 ZNF330Q9Y3S2 320 aaPredicted RBP6.51□□□□□ -1.37
PTCD3-213ENST00000480102 KDM6AO15550 1401 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-213ENST00000480102 PAPPAQ13219 1627 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 ZNF831Q5JPB2 1677 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 UPP2O95045 317 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 SIK1P57059 783 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 RAB15P59190 212 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 MCCD1P59942 119 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-213ENST00000480102 Q6ZVU0 165 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 TEX13AQ9BXU3 409 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-213ENST00000480102 SPON1Q9HCB6 807 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 ATG3Q9NT62 314 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 CCNL1Q9UK58 526 aaPredicted RBP6.5□□□□□ -1.37
PTCD3-213ENST00000480102 LRP5O75197 1615 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 CNTNAP4Q9C0A0 1308 aa6.5□□□□□ -1.37
PTCD3-213ENST00000480102 ADAMTS7Q9UKP4 1686 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 ERVH48-1M5A8F1 160 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 RNMTO43148 476 aaKnown RBP6.49□□□□□ -1.37
PTCD3-213ENST00000480102 CABP4P57796 275 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 CBLBQ13191 982 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 IRF5Q13568 498 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 R3HDM1Q15032 1099 aaKnown RBP6.49□□□□□ -1.37
PTCD3-213ENST00000480102 MTHFSDQ2M296 383 aaKnown RBP6.49□□□□□ -1.37
PTCD3-213ENST00000480102 C6orf118Q5T5N4 469 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 MPRIPQ6WCQ1 1025 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 ZNF784Q8NCA9 323 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-213ENST00000480102 ACSBG1Q96GR2 724 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 PLEKHF1Q96S99 279 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 TSEN34Q9BSV6 310 aaKnown RBP6.49□□□□□ -1.37
PTCD3-213ENST00000480102 GDPD2Q9HCC8 539 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 TMPRSS4Q9NRS4 437 aa6.49□□□□□ -1.37
PTCD3-213ENST00000480102 SHANK3Q9BYB0 1731 aa6.48□□□□□ -1.37
PTCD3-213ENST00000480102 CICQ96RK0 1608 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-213ENST00000480102 GIGYF1O75420 1035 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-213ENST00000480102 NEFMP07197 916 aa6.48□□□□□ -1.37
PTCD3-213ENST00000480102 BMP2P12643 396 aa6.48□□□□□ -1.37
PTCD3-213ENST00000480102 DDX10Q13206 875 aaKnown RBP6.48□□□□□ -1.37
PTCD3-213ENST00000480102 NGEFQ8N5V2 710 aa6.48□□□□□ -1.37
PTCD3-213ENST00000480102 PNISRQ8TF01 805 aaKnown RBP6.48□□□□□ -1.37
PTCD3-213ENST00000480102 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-213ENST00000480102 RGPD5Q99666 1765 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 U2AF1L5P0DN76 240 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-213ENST00000480102 PRKAR2BP31323 418 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 U2AF1Q01081 240 aaKnown RBP eCLIP6.47□□□□□ -1.37
PTCD3-213ENST00000480102 LMOD3Q0VAK6 560 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 ZNF827Q17R98 1081 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 NFATC2IPQ8NCF5 419 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 IL17REQ8NFR9 667 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 ASAP1Q9ULH1 1129 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 PNPLA7Q6ZV29 1317 aa6.47□□□□□ -1.37
PTCD3-213ENST00000480102 HEG1Q9ULI3 1381 aa6.46□□□□□ -1.37
PTCD3-213ENST00000480102 SBF2Q86WG5 1849 aa6.46□□□□□ -1.37
PTCD3-213ENST00000480102 U2SURPO15042 1029 aaKnown RBP6.46□□□□□ -1.38
PTCD3-213ENST00000480102 LILRA1O75019 489 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 RPS6KA4O75676 772 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 HMOX1P09601 288 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 ABL2P42684 1182 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 NUP188Q5SRE5 1749 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 RNF20Q5VTR2 975 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 ZNF790Q6PG37 636 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 PHACTR3Q96KR7 559 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 CHMP4AQ9BY43 222 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 TFCP2L1Q9NZI6 479 aa6.46□□□□□ -1.38
PTCD3-213ENST00000480102 MAP2P11137 1827 aaKnown RBP6.46□□□□□ -1.38
PTCD3-213ENST00000480102 SPINT1O43278 529 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 STARD3NLO95772 234 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 ADH1AP07327 375 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 TEFQ10587 303 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 FLIIQ13045 1269 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 NFE2L2Q16236 605 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 CCDC27Q2M243 656 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 NLGN1Q8N2Q7 840 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 RTF1Q92541 710 aaKnown RBP6.45□□□□□ -1.38
PTCD3-213ENST00000480102 SLC4A9Q96Q91 983 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 ARXQ96QS3 562 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 CYLDQ9NQC7 956 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 COG6Q9Y2V7 657 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 CD2APQ9Y5K6 639 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 C5P01031 1676 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 SOS1Q07889 1333 aaPredicted RBP6.45□□□□□ -1.38
PTCD3-213ENST00000480102 LY75O60449 1722 aa6.45□□□□□ -1.38
PTCD3-213ENST00000480102 HOXB7P09629 217 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 POLD1P28340 1107 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 ADD1P35611 737 aaKnown RBP6.44□□□□□ -1.38
PTCD3-213ENST00000480102 CALD1Q05682 793 aaKnown RBP6.44□□□□□ -1.38
PTCD3-213ENST00000480102 VAC14Q08AM6 782 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 NFX1Q12986 1120 aaKnown RBP6.44□□□□□ -1.38
PTCD3-213ENST00000480102 ITPK1Q13572 414 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 TAF7Q15545 349 aaPredicted RBP6.44□□□□□ -1.38
PTCD3-213ENST00000480102 WASHC4Q2M389 1173 aa6.44□□□□□ -1.38
PTCD3-213ENST00000480102 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms