RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
SMG5-204ENST00000476954 ISCA1Q9BUE6 129 aa20.2■□□□□ 0.82
SMG5-204ENST00000476954 RANBP2P49792 3224 aaKnown RBP20.19■□□□□ 0.82
SMG5-204ENST00000476954 SLC10A4Q96EP9 437 aa20.19■□□□□ 0.82
SMG5-204ENST00000476954 WNK4Q96J92 1243 aa20.19■□□□□ 0.82
SMG5-204ENST00000476954 IRS4O14654 1257 aaPredicted RBP20.18■□□□□ 0.82
SMG5-204ENST00000476954 INHBEP58166 350 aa20.18■□□□□ 0.82
SMG5-204ENST00000476954 NFE2L2Q16236 605 aa20.18■□□□□ 0.82
SMG5-204ENST00000476954 PTCH2Q9Y6C5 1203 aa20.18■□□□□ 0.82
SMG5-204ENST00000476954 SSC5DA1L4H1 1573 aa20.17■□□□□ 0.82
SMG5-204ENST00000476954 SP3Q02447 781 aa20.17■□□□□ 0.82
SMG5-204ENST00000476954 SLC4A8Q2Y0W8 1093 aa20.17■□□□□ 0.82
SMG5-204ENST00000476954 DACT2Q5SW24 774 aa20.17■□□□□ 0.82
SMG5-204ENST00000476954 PLEKHF1Q96S99 279 aa20.17■□□□□ 0.82
SMG5-204ENST00000476954 ZSWIM8A7E2V4 1837 aa20.17■□□□□ 0.82
SMG5-204ENST00000476954 GJA5P36382 358 aa20.16■□□□□ 0.82
SMG5-204ENST00000476954 KRT24Q2M2I5 525 aa20.16■□□□□ 0.82
SMG5-204ENST00000476954 FBXW7Q969H0 707 aa20.16■□□□□ 0.82
SMG5-204ENST00000476954 PTPN18Q99952 460 aa20.16■□□□□ 0.82
SMG5-204ENST00000476954 A0A0C4DFX4 3053 aa20.16■□□□□ 0.82
SMG5-204ENST00000476954 SLC9C1Q4G0N8 1177 aa20.15■□□□□ 0.82
SMG5-204ENST00000476954 PODNQ7Z5L7 613 aa20.15■□□□□ 0.82
SMG5-204ENST00000476954 CCDC85AQ96PX6 553 aaPredicted RBP20.15■□□□□ 0.82
SMG5-204ENST00000476954 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
SMG5-204ENST00000476954 ZBTB48P10074 688 aaPredicted RBP20.14■□□□□ 0.81
SMG5-204ENST00000476954 OGFOD1Q8N543 542 aa20.14■□□□□ 0.81
SMG5-204ENST00000476954 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.81
SMG5-204ENST00000476954 CHPF2Q9P2E5 772 aa20.14■□□□□ 0.81
SMG5-204ENST00000476954 XDHP47989 1333 aa20.13■□□□□ 0.81
SMG5-204ENST00000476954 CLSPNQ9HAW4 1339 aa20.13■□□□□ 0.81
SMG5-204ENST00000476954 NEFMP07197 916 aa20.13■□□□□ 0.81
SMG5-204ENST00000476954 APOBEC3FQ8IUX4 373 aaKnown RBP20.13■□□□□ 0.81
SMG5-204ENST00000476954 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
SMG5-204ENST00000476954 ANKRD13DQ6ZTN6 518 aa20.12■□□□□ 0.81
SMG5-204ENST00000476954 SH3TC2Q8TF17 1288 aa20.12■□□□□ 0.81
SMG5-204ENST00000476954 JARID2Q92833 1246 aaPredicted RBP20.12■□□□□ 0.81
SMG5-204ENST00000476954 MAP3K11Q16584 847 aa20.11■□□□□ 0.81
SMG5-204ENST00000476954 DPF3Q92784 378 aa20.11■□□□□ 0.81
SMG5-204ENST00000476954 ZBED3Q96IU2 234 aaPredicted RBP20.11■□□□□ 0.81
SMG5-204ENST00000476954 PRO3102Q9H379 93 aa20.11■□□□□ 0.81
SMG5-204ENST00000476954 COL6A3P12111 3177 aa20.11■□□□□ 0.81
SMG5-204ENST00000476954 SOX1O00570 391 aaPredicted RBP20.1■□□□□ 0.81
SMG5-204ENST00000476954 NBPF11Q86T75 865 aa20.1■□□□□ 0.81
SMG5-204ENST00000476954 KIAA0825Q8IV33 1275 aa20.1■□□□□ 0.81
SMG5-204ENST00000476954 DEFB129Q9H1M3 183 aa20.1■□□□□ 0.81
SMG5-204ENST00000476954 OTOFQ9HC10 1997 aa20.1■□□□□ 0.81
SMG5-204ENST00000476954 ATP2B4P23634 1241 aa20.09■□□□□ 0.81
SMG5-204ENST00000476954 SHISA4Q96DD7 197 aa20.09■□□□□ 0.81
SMG5-204ENST00000476954 OTUD7BQ6GQQ9 843 aa20.08■□□□□ 0.81
SMG5-204ENST00000476954 TXNRD3Q86VQ6 643 aa20.08■□□□□ 0.81
SMG5-204ENST00000476954 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.81
SMG5-204ENST00000476954 MED23Q9ULK4 1368 aa20.08■□□□□ 0.8
SMG5-204ENST00000476954 TESPA1A2RU30 521 aaPredicted RBP20.07■□□□□ 0.8
SMG5-204ENST00000476954 STRIP1Q5VSL9 837 aa20.07■□□□□ 0.8
SMG5-204ENST00000476954 LRCH3Q96II8 777 aa20.07■□□□□ 0.8
SMG5-204ENST00000476954 ECM29Q5VYK3 1845 aa20.06■□□□□ 0.8
SMG5-204ENST00000476954 MYO3BQ8WXR4 1341 aa20.06■□□□□ 0.8
SMG5-204ENST00000476954 COL1A1P02452 1464 aaPredicted RBP20.06■□□□□ 0.8
SMG5-204ENST00000476954 PPP1R12BO60237 982 aaPredicted RBP20.06■□□□□ 0.8
SMG5-204ENST00000476954 TRIM28Q13263 835 aaKnown RBP20.06■□□□□ 0.8
SMG5-204ENST00000476954 ARHGAP39Q9C0H5 1083 aa20.06■□□□□ 0.8
SMG5-204ENST00000476954 CCDC152Q4G0S7 254 aa20.05■□□□□ 0.8
SMG5-204ENST00000476954 NBPF12Q5TAG4 269 aaPredicted RBP20.05■□□□□ 0.8
SMG5-204ENST00000476954 ANKRD18AQ8IVF6 992 aa20.05■□□□□ 0.8
SMG5-204ENST00000476954 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
SMG5-204ENST00000476954 AOX1Q06278 1338 aa20.04■□□□□ 0.8
SMG5-204ENST00000476954 MAPK8IP3Q9UPT6 1336 aa20.04■□□□□ 0.8
SMG5-204ENST00000476954 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
SMG5-204ENST00000476954 KLRK1P26718 216 aa20.04■□□□□ 0.8
SMG5-204ENST00000476954 MNX1P50219 401 aaPredicted RBP20.04■□□□□ 0.8
SMG5-204ENST00000476954 MTFR1Q15390 333 aa20.04■□□□□ 0.8
SMG5-204ENST00000476954 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
SMG5-204ENST00000476954 ELP3Q9H9T3 547 aa20.04■□□□□ 0.8
SMG5-204ENST00000476954 ECM2O94769 699 aaPredicted RBP20.03■□□□□ 0.8
SMG5-204ENST00000476954 RIPK4P57078 832 aa20.03■□□□□ 0.8
SMG5-204ENST00000476954 TAF1CQ15572 869 aaPredicted RBP20.03■□□□□ 0.8
SMG5-204ENST00000476954 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
SMG5-204ENST00000476954 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
SMG5-204ENST00000476954 BRI3BPQ8WY22 251 aa20.03■□□□□ 0.8
SMG5-204ENST00000476954 MS4A4AQ96JQ5 239 aa20.03■□□□□ 0.8
SMG5-204ENST00000476954 CLRN2A0PK11 232 aa20.02■□□□□ 0.8
SMG5-204ENST00000476954 TRIM26Q12899 539 aaPredicted RBP20.02■□□□□ 0.8
SMG5-204ENST00000476954 COA1Q9GZY4 146 aa20.02■□□□□ 0.8
SMG5-204ENST00000476954 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.8
SMG5-204ENST00000476954 MINPP1Q9UNW1 487 aa20.02■□□□□ 0.8
SMG5-204ENST00000476954 PDE8AO60658 829 aa20.01■□□□□ 0.79
SMG5-204ENST00000476954 CCT4P50991 539 aaKnown RBP20.01■□□□□ 0.79
SMG5-204ENST00000476954 GTF2IP78347 998 aa20.01■□□□□ 0.79
SMG5-204ENST00000476954 DLGAP5Q15398 846 aa20.01■□□□□ 0.79
SMG5-204ENST00000476954 OPTNQ96CV9 577 aa20.01■□□□□ 0.79
SMG5-204ENST00000476954 IREB2P48200 963 aaKnown RBP20■□□□□ 0.79
SMG5-204ENST00000476954 ARHGEF6Q15052 776 aa20■□□□□ 0.79
SMG5-204ENST00000476954 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
SMG5-204ENST00000476954 ZFYVE28Q9HCC9 887 aa20■□□□□ 0.79
SMG5-204ENST00000476954 UNCXA6NJT0 531 aa19.99■□□□□ 0.79
SMG5-204ENST00000476954 ZBTB7BO15156 539 aaPredicted RBP19.99■□□□□ 0.79
SMG5-204ENST00000476954 PCCAP05165 728 aaPredicted RBP19.99■□□□□ 0.79
SMG5-204ENST00000476954 SUPT20HL1Q3ZLR7 823 aa19.99■□□□□ 0.79
SMG5-204ENST00000476954 UBE2Q1Q7Z7E8 422 aa19.99■□□□□ 0.79
SMG5-204ENST00000476954 ANKRD13AQ8IZ07 590 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms