RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 UBE4AQ14139 1066 aa16.6■□□□□ 0.25
TRAF4-210ENST00000475329 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
TRAF4-210ENST00000475329 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
TRAF4-210ENST00000475329 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRAF4-210ENST00000475329 SCARF1Q14162 830 aa16.59■□□□□ 0.25
TRAF4-210ENST00000475329 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
TRAF4-210ENST00000475329 MSL1Q68DK7 614 aa16.59■□□□□ 0.25
TRAF4-210ENST00000475329 IL25Q9H293 177 aa16.59■□□□□ 0.25
TRAF4-210ENST00000475329 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
TRAF4-210ENST00000475329 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
TRAF4-210ENST00000475329 MCAMP43121 646 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 KCNJ4P48050 445 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 BECN1Q14457 450 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 FAM227BQ96M60 508 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 BRIP1Q9BX63 1249 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
TRAF4-210ENST00000475329 DLEC1Q9Y238 1755 aa16.57■□□□□ 0.24
TRAF4-210ENST00000475329 A0A0D9SFI3 127 aa16.57■□□□□ 0.24
TRAF4-210ENST00000475329 SNAP23O00161 211 aa16.57■□□□□ 0.24
TRAF4-210ENST00000475329 HOXA10P31260 410 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-210ENST00000475329 ZAP70P43403 619 aa16.57■□□□□ 0.24
TRAF4-210ENST00000475329 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-210ENST00000475329 CRAMP1Q96RY5 1269 aa16.57■□□□□ 0.24
TRAF4-210ENST00000475329 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
TRAF4-210ENST00000475329 DAXXQ9UER7 740 aaPredicted RBP16.57■□□□□ 0.24
TRAF4-210ENST00000475329 KIF2CQ99661 725 aa16.56■□□□□ 0.24
TRAF4-210ENST00000475329 ANTXR1Q9H6X2 564 aa16.56■□□□□ 0.24
TRAF4-210ENST00000475329 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
TRAF4-210ENST00000475329 CCDC88AQ3V6T2 1871 aa16.55■□□□□ 0.24
TRAF4-210ENST00000475329 ZNF804BA4D1E1 1349 aa16.55■□□□□ 0.24
TRAF4-210ENST00000475329 CCDC171Q6TFL3 1326 aa16.55■□□□□ 0.24
TRAF4-210ENST00000475329 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
TRAF4-210ENST00000475329 PDE6BP35913 854 aa16.55■□□□□ 0.24
TRAF4-210ENST00000475329 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
TRAF4-210ENST00000475329 TMC4Q7Z404 712 aa16.55■□□□□ 0.24
TRAF4-210ENST00000475329 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■■□□□ 13.1
TRAF4-210ENST00000475329 GNL3LQ9NVN8 582 aaKnown RBP16.55■□□□□ 0.24
TRAF4-210ENST00000475329 XDHP47989 1333 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
TRAF4-210ENST00000475329 BBOX1O75936 387 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 BCAMP50895 628 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 ANAPC15P60006 121 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 RASGRF1Q13972 1273 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 RABEP1Q15276 862 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
TRAF4-210ENST00000475329 NPR1P16066 1061 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 ZSCAN25Q6NSZ9 544 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 LEMD3Q9Y2U8 911 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 KIF13BQ9NQT8 1826 aa16.53■□□□□ 0.24
TRAF4-210ENST00000475329 CYP2E1P05181 493 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-210ENST00000475329 HSPA4P34932 840 aa16.52■□□□□ 0.24
TRAF4-210ENST00000475329 GYG1P46976 350 aa16.52■□□□□ 0.24
TRAF4-210ENST00000475329 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
TRAF4-210ENST00000475329 VPS37DQ86XT2 251 aa16.52■□□□□ 0.24
TRAF4-210ENST00000475329 KIAA1551Q9HCM1 1747 aa16.52■□□□□ 0.24
TRAF4-210ENST00000475329 DUOX1Q9NRD9 1551 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-210ENST00000475329 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
TRAF4-210ENST00000475329 SEMA3EO15041 775 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 SRGNP10124 158 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 PTH1RQ03431 593 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 HSCBQ8IWL3 235 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 SLC16A10Q8TF71 515 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 SNX21Q969T3 373 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 IL17RAQ96F46 866 aa16.51■□□□□ 0.23
TRAF4-210ENST00000475329 PIH1D3Q9NQM4 214 aaKnown RBP16.51■□□□□ 0.23
TRAF4-210ENST00000475329 LAMA4Q16363 1823 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 APPBP2Q92624 585 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 MASTLQ96GX5 879 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 FAM84BQ96KN1 310 aaPredicted RBP16.5■□□□□ 0.23
TRAF4-210ENST00000475329 SEC62Q99442 399 aaKnown RBP16.5■□□□□ 0.23
TRAF4-210ENST00000475329 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
TRAF4-210ENST00000475329 MAST3O60307 1309 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 PDS5AQ29RF7 1337 aaKnown RBP16.49■□□□□ 0.23
TRAF4-210ENST00000475329 IRS2Q9Y4H2 1338 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 WTIPA6NIX2 430 aaPredicted RBP16.49■□□□□ 0.23
TRAF4-210ENST00000475329 IDH1O75874 414 aaKnown RBP16.49■□□□□ 0.23
TRAF4-210ENST00000475329 CHGBP05060 677 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 KLRK1P26718 216 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 HIBADHP31937 336 aaKnown RBP16.49■□□□□ 0.23
TRAF4-210ENST00000475329 ADD2P35612 726 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 GPSM2P81274 684 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 C10orf71Q711Q0 1435 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 MAP4K1Q92918 833 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 DENND2AQ9ULE3 1009 aa16.49■□□□□ 0.23
TRAF4-210ENST00000475329 RBM8AQ9Y5S9 174 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms