RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 COA1Q9GZY4 146 aa21.06■□□□□ 0.96
SCAF11-206ENST00000474828 ECE2O60344 883 aa21.05■□□□□ 0.96
SCAF11-206ENST00000474828 EIF6P56537 245 aaKnown RBP21.05■□□□□ 0.96
SCAF11-206ENST00000474828 DDNO94850 711 aaPredicted RBP21.04■□□□□ 0.96
SCAF11-206ENST00000474828 PUM3Q15397 648 aaKnown RBP21.04■□□□□ 0.96
SCAF11-206ENST00000474828 DBNDD1Q9H9R9 158 aa21.04■□□□□ 0.96
SCAF11-206ENST00000474828 ZNF646O15015 1829 aaPredicted RBP21.04■□□□□ 0.96
SCAF11-206ENST00000474828 PSME4Q14997 1843 aa21.04■□□□□ 0.96
SCAF11-206ENST00000474828 IL1R1P14778 569 aa21.03■□□□□ 0.96
SCAF11-206ENST00000474828 AAMPQ13685 434 aa21.03■□□□□ 0.96
SCAF11-206ENST00000474828 DOK7Q18PE1 504 aa21.03■□□□□ 0.96
SCAF11-206ENST00000474828 FBXO33Q7Z6M2 555 aa21.03■□□□□ 0.96
SCAF11-206ENST00000474828 SIL1Q9H173 461 aa21.03■□□□□ 0.96
SCAF11-206ENST00000474828 SCN9AQ15858 1988 aa21.03■□□□□ 0.96
SCAF11-206ENST00000474828 SASH1O94885 1247 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 VIL1P09327 827 aaKnown RBP21.02■□□□□ 0.96
SCAF11-206ENST00000474828 KCNJ4P48050 445 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 TNIP1Q15025 636 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 CIAPIN1Q6FI81 312 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 LPIN2Q92539 896 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 FAM84BQ96KN1 310 aaPredicted RBP21.02■□□□□ 0.96
SCAF11-206ENST00000474828 CD209Q9NNX6 404 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 CEP126Q9P2H0 1117 aa21.02■□□□□ 0.96
SCAF11-206ENST00000474828 KIF3CO14782 793 aa21.01■□□□□ 0.95
SCAF11-206ENST00000474828 GPR108Q9NPR9 543 aa21.01■□□□□ 0.95
SCAF11-206ENST00000474828 KCNQ5Q9NR82 932 aa21.01■□□□□ 0.95
SCAF11-206ENST00000474828 SUPT16HQ9Y5B9 1047 aaKnown RBP21.01■□□□□ 0.95
SCAF11-206ENST00000474828 SCN4AP35499 1836 aa21■□□□□ 0.95
SCAF11-206ENST00000474828 SCNN1DP51172 638 aa21■□□□□ 0.95
SCAF11-206ENST00000474828 TDRD7Q8NHU6 1098 aaKnown RBP21■□□□□ 0.95
SCAF11-206ENST00000474828 DPF2Q92785 391 aa21■□□□□ 0.95
SCAF11-206ENST00000474828 GMLQ99445 158 aa21■□□□□ 0.95
SCAF11-206ENST00000474828 NMRK2Q9NPI5 230 aa21■□□□□ 0.95
SCAF11-206ENST00000474828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21■□□□□ 0.95
SCAF11-206ENST00000474828 VEGFAP15692 232 aaPredicted RBP20.99■□□□□ 0.95
SCAF11-206ENST00000474828 STRIP1Q5VSL9 837 aa20.99■□□□□ 0.95
SCAF11-206ENST00000474828 ZNF804AQ7Z570 1209 aa20.99■□□□□ 0.95
SCAF11-206ENST00000474828 CRBNQ96SW2 442 aa20.99■□□□□ 0.95
SCAF11-206ENST00000474828 ARAP2Q8WZ64 1704 aa20.98■□□□□ 0.95
SCAF11-206ENST00000474828 PSMD14O00487 310 aa20.98■□□□□ 0.95
SCAF11-206ENST00000474828 HMMRO75330 724 aa20.98■□□□□ 0.95
SCAF11-206ENST00000474828 RAD17O75943 681 aa20.98■□□□□ 0.95
SCAF11-206ENST00000474828 RPS12P25398 132 aaKnown RBP20.98■□□□□ 0.95
SCAF11-206ENST00000474828 TFCP2Q12800 502 aa20.98■□□□□ 0.95
SCAF11-206ENST00000474828 G3BP1Q13283 466 aaKnown RBP eCLIP20.98■□□□□ 0.95
SCAF11-206ENST00000474828 DACT2Q5SW24 774 aa20.98■□□□□ 0.95
SCAF11-206ENST00000474828 IQCA1LA6NCM1 817 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 USP17L3A6NCW0 530 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 USP17L4A6NCW7 530 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 SURF6O75683 361 aaKnown RBP20.97■□□□□ 0.95
SCAF11-206ENST00000474828 IFIT1P09914 478 aaKnown RBP20.97■□□□□ 0.95
SCAF11-206ENST00000474828 HIBADHP31937 336 aaKnown RBP20.97■□□□□ 0.95
SCAF11-206ENST00000474828 FKBP1AP62942 108 aaKnown RBP20.97■□□□□ 0.95
SCAF11-206ENST00000474828 ATP2B3Q16720 1220 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 USP17L1Q7RTZ2 530 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 AKAP2Q9Y2D5 859 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 FAM205AQ6ZU69 1335 aa20.97■□□□□ 0.95
SCAF11-206ENST00000474828 SLC5A1P13866 664 aa20.96■□□□□ 0.95
SCAF11-206ENST00000474828 GYG1P46976 350 aa20.96■□□□□ 0.95
SCAF11-206ENST00000474828 AGBL3Q8NEM8 1001 aa20.96■□□□□ 0.95
SCAF11-206ENST00000474828 RRAGCQ9HB90 399 aa20.96■□□□□ 0.95
SCAF11-206ENST00000474828 GPRC5DQ9NZD1 345 aa20.96■□□□□ 0.95
SCAF11-206ENST00000474828 PCDHB15Q9Y5E8 787 aa20.96■□□□□ 0.95
SCAF11-206ENST00000474828 GMPSP49915 693 aaPredicted RBP20.95■□□□□ 0.94
SCAF11-206ENST00000474828 MMP14P50281 582 aa20.95■□□□□ 0.94
SCAF11-206ENST00000474828 HSP90AB4PQ58FF6 505 aa20.95■□□□□ 0.94
SCAF11-206ENST00000474828 RSBN1LQ6PCB5 846 aaPredicted RBP20.95■□□□□ 0.94
SCAF11-206ENST00000474828 A0A1B0GUL7 405 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 G3V3G9 751 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 HSPA6P17066 643 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 CAVIN4Q5BKX8 364 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 DCAF8Q5TAQ9 597 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 ERC1Q8IUD2 1116 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 TAF1DQ9H5J8 278 aaPredicted RBP20.94■□□□□ 0.94
SCAF11-206ENST00000474828 HACL1Q9UJ83 578 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 GJA3Q9Y6H8 435 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 ADAMTSL1Q8N6G6 1762 aa20.94■□□□□ 0.94
SCAF11-206ENST00000474828 BCAMP50895 628 aa20.93■□□□□ 0.94
SCAF11-206ENST00000474828 TIMM10P62072 90 aa20.93■□□□□ 0.94
SCAF11-206ENST00000474828 MYO3BQ8WXR4 1341 aa20.93■□□□□ 0.94
SCAF11-206ENST00000474828 RAB11FIP3O75154 756 aa20.92■□□□□ 0.94
SCAF11-206ENST00000474828 ZNF280AP59817 542 aaPredicted RBP20.92■□□□□ 0.94
SCAF11-206ENST00000474828 TTLL5Q6EMB2 1281 aa20.92■□□□□ 0.94
SCAF11-206ENST00000474828 DCTPP1Q9H773 170 aa20.92■□□□□ 0.94
SCAF11-206ENST00000474828 EXOC6BQ9Y2D4 811 aa20.92■□□□□ 0.94
SCAF11-206ENST00000474828 PDS5AQ29RF7 1337 aaKnown RBP20.92■□□□□ 0.94
SCAF11-206ENST00000474828 SEMA3EO15041 775 aa20.91■□□□□ 0.94
SCAF11-206ENST00000474828 TNNI3KQ59H18 835 aa20.91■□□□□ 0.94
SCAF11-206ENST00000474828 ZBTB12Q9Y330 459 aaPredicted RBP20.91■□□□□ 0.94
SCAF11-206ENST00000474828 FPGT-TNNI3KV9GXZ4 949 aa20.91■□□□□ 0.94
SCAF11-206ENST00000474828 TOMM70O94826 608 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 ADORA1P30542 326 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 EPHX2P34913 555 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 EPS15P42566 896 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 GTF2IP78347 998 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 CERS5Q8N5B7 392 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 XAGE2Q96GT9 111 aa20.9■□□□□ 0.94
SCAF11-206ENST00000474828 ADARB2Q9NS39 739 aaKnown RBP20.9■□□□□ 0.94
SCAF11-206ENST00000474828 CNOT7Q9UIV1 285 aaKnown RBP20.9■□□□□ 0.94
SCAF11-206ENST00000474828 HDAC1Q13547 482 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms