RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SHISA5Q8N114 240 aa3.04□□□□□ -1.92
UBXN4-207ENST00000471246 GSX2Q9BZM3 304 aa3.04□□□□□ -1.92
UBXN4-207ENST00000471246 TMPRSS5Q9H3S3 457 aa3.04□□□□□ -1.92
UBXN4-207ENST00000471246 QTRT2Q9H974 415 aaKnown RBP3.04□□□□□ -1.92
UBXN4-207ENST00000471246 BSDC1Q9NW68 430 aaPredicted RBP3.04□□□□□ -1.92
UBXN4-207ENST00000471246 ANKIB1Q9P2G1 1089 aa3.04□□□□□ -1.92
UBXN4-207ENST00000471246 ACIN1Q9UKV3 1341 aaKnown RBP3.03□□□□□ -1.92
UBXN4-207ENST00000471246 ATG7O95352 703 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 NFKB1P19838 968 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 SRPK2P78362 688 aaKnown RBP3.03□□□□□ -1.92
UBXN4-207ENST00000471246 FAM69CQ0P6D2 419 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 FKBP5Q13451 457 aaPredicted RBP3.03□□□□□ -1.92
UBXN4-207ENST00000471246 DGKZQ13574 1117 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 ELOAQ14241 798 aaKnown RBP3.03□□□□□ -1.92
UBXN4-207ENST00000471246 ZNF792Q3KQV3 632 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 TMEM164Q5U3C3 297 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 BTLAQ7Z6A9 289 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 CCDC82Q8N4S0 544 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 VTI1AQ96AJ9 217 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 PBXIP1Q96AQ6 731 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 SMG9Q9H0W8 520 aaKnown RBP3.03□□□□□ -1.92
UBXN4-207ENST00000471246 KCNF1Q9H3M0 494 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 EFCC1Q9HA90 598 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 ATG3Q9NT62 314 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 SERPINA10Q9UK55 444 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 BCS1LQ9Y276 419 aa3.03□□□□□ -1.92
UBXN4-207ENST00000471246 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.03□□□□□ -1.92
UBXN4-207ENST00000471246 PRMT3O60678 531 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 BMP3P12645 472 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 HOXA5P20719 270 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 MLLT1Q03111 559 aaPredicted RBP3.02□□□□□ -1.93
UBXN4-207ENST00000471246 OCLNQ16625 522 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 ACAD11Q709F0 780 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 C14orf37Q86TY3 774 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 WFDC3Q8IUB2 231 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 GALNT11Q8NCW6 608 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 RELTQ969Z4 430 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 MYO19Q96H55 970 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 PRIMPOLQ96LW4 560 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.02□□□□□ -1.93
UBXN4-207ENST00000471246 KLK14Q9P0G3 267 aa3.02□□□□□ -1.93
UBXN4-207ENST00000471246 TSPAN15O95858 294 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 IDH3AP50213 366 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 KIAA1211Q6ZU35 1233 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 ATG4DQ86TL0 474 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-207ENST00000471246 AMIGO3Q86WK7 504 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 FBXL6Q8N531 539 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 GLIS3Q8NEA6 775 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 MKNK1Q9BUB5 465 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 OSBPL1AQ9BXW6 950 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 C1orf115Q9H7X2 142 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 SRA1Q9HD15 236 aaKnown RBP3.01□□□□□ -1.93
UBXN4-207ENST00000471246 KCNK4Q9NYG8 393 aa3.01□□□□□ -1.93
UBXN4-207ENST00000471246 CXXC1Q9P0U4 656 aaPredicted RBP3.01□□□□□ -1.93
UBXN4-207ENST00000471246 DMGDHQ9UI17 866 aaKnown RBP3.01□□□□□ -1.93
UBXN4-207ENST00000471246 EPB42P16452 691 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 INPP5BP32019 993 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 ARSDP51689 593 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 PCSK7Q16549 785 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 PPP1R3FQ6ZSY5 799 aaPredicted RBP3□□□□□ -1.93
UBXN4-207ENST00000471246 MAP4K3Q8IVH8 894 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 IL22RA1Q8N6P7 574 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 TRPM4Q8TD43 1214 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 CLP1Q92989 425 aaKnown RBP3□□□□□ -1.93
UBXN4-207ENST00000471246 PNMA5Q96PV4 448 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 SLAIN2Q9P270 581 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 LRFN2Q9ULH4 789 aa3□□□□□ -1.93
UBXN4-207ENST00000471246 LRRC10BA6NIK2 292 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 TM4SF5O14894 197 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 MICAL2O94851 1124 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 CCINQ13939 588 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 PLCL1Q15111 1095 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 C11orf91Q3C1V1 193 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 COX20Q5RI15 118 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 GDF6Q6KF10 455 aaPredicted RBP2.99□□□□□ -1.93
UBXN4-207ENST00000471246 C16orf46Q6P387 395 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 ZNF574Q6ZN55 896 aaPredicted RBP2.99□□□□□ -1.93
UBXN4-207ENST00000471246 CAPN12Q6ZSI9 719 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 HFE2Q6ZVN8 426 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 ANKLE2Q86XL3 938 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 TREML1Q86YW5 311 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 GIMAP7Q8NHV1 300 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 DCAF11Q8TEB1 546 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 IFT43Q96FT9 208 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 SAP130Q9H0E3 1048 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.99□□□□□ -1.93
UBXN4-207ENST00000471246 ZFATQ9P243 1243 aa2.99□□□□□ -1.93
UBXN4-207ENST00000471246 TNFRSF10BO14763 440 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 CYP26A1O43174 497 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 SUV39H1O43463 412 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 FOXD2O60548 495 aaPredicted RBP2.98□□□□□ -1.93
UBXN4-207ENST00000471246 KRT1P04264 644 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 ATP2B4P23634 1241 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 PREPP48147 710 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 GPLD1P80108 840 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 NFKB2Q00653 900 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 CPSF6Q16630 551 aaKnown RBP eCLIP2.98□□□□□ -1.93
UBXN4-207ENST00000471246 FAM26DQ5JW98 314 aa2.98□□□□□ -1.93
UBXN4-207ENST00000471246 DHX32Q7L7V1 743 aaKnown RBP2.98□□□□□ -1.93
UBXN4-207ENST00000471246 KRT25Q7Z3Z0 450 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms