RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 TTLL5Q6EMB2 1281 aa16.84■□□□□ 0.29
COMMD3-205ENST00000463688 AIDAQ96BJ3 306 aa16.84■□□□□ 0.29
COMMD3-205ENST00000463688 COL4A5P29400 1685 aa16.84■□□□□ 0.29
COMMD3-205ENST00000463688 DUOX1Q9NRD9 1551 aa16.83■□□□□ 0.29
COMMD3-205ENST00000463688 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.28
COMMD3-205ENST00000463688 FKBP1AP62942 108 aaKnown RBP16.83■□□□□ 0.28
COMMD3-205ENST00000463688 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
COMMD3-205ENST00000463688 PITPNM2Q9BZ72 1349 aa16.82■□□□□ 0.28
COMMD3-205ENST00000463688 GNAI3P08754 354 aa16.82■□□□□ 0.28
COMMD3-205ENST00000463688 CAVIN4Q5BKX8 364 aa16.82■□□□□ 0.28
COMMD3-205ENST00000463688 KRT26Q7Z3Y9 468 aa16.82■□□□□ 0.28
COMMD3-205ENST00000463688 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
COMMD3-205ENST00000463688 BEGAINQ9BUH8 593 aa16.82■□□□□ 0.28
COMMD3-205ENST00000463688 NOB1Q9ULX3 412 aaKnown RBP16.82■□□□□ 0.28
COMMD3-205ENST00000463688 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-205ENST00000463688 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
COMMD3-205ENST00000463688 HTRA3P83110 453 aa16.81■□□□□ 0.28
COMMD3-205ENST00000463688 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
COMMD3-205ENST00000463688 TBC1D10BQ4KMP7 808 aaPredicted RBP16.81■□□□□ 0.28
COMMD3-205ENST00000463688 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
COMMD3-205ENST00000463688 C2orf69Q8N8R5 385 aa16.81■□□□□ 0.28
COMMD3-205ENST00000463688 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
COMMD3-205ENST00000463688 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
COMMD3-205ENST00000463688 MYOZ2Q9NPC6 264 aa16.81■□□□□ 0.28
COMMD3-205ENST00000463688 MKRN1Q9UHC7 482 aaKnown RBP16.81■□□□□ 0.28
COMMD3-205ENST00000463688 MYO1BO43795 1136 aa16.8■□□□□ 0.28
COMMD3-205ENST00000463688 CELF2O95319 508 aaKnown RBP16.8■□□□□ 0.28
COMMD3-205ENST00000463688 DACT2Q5SW24 774 aa16.8■□□□□ 0.28
COMMD3-205ENST00000463688 RBM26Q5T8P6 1007 aaKnown RBP16.8■□□□□ 0.28
COMMD3-205ENST00000463688 MIER1Q8N108 512 aa16.8■□□□□ 0.28
COMMD3-205ENST00000463688 TRPM4Q8TD43 1214 aa16.8■□□□□ 0.28
COMMD3-205ENST00000463688 GPR101Q96P66 508 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-205ENST00000463688 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
COMMD3-205ENST00000463688 BICC1Q9H694 974 aaKnown RBP16.8■□□□□ 0.28
COMMD3-205ENST00000463688 CD209Q9NNX6 404 aa16.8■□□□□ 0.28
COMMD3-205ENST00000463688 NF2P35240 595 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 MAP2K2P36507 400 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 HIRAP54198 1017 aaPredicted RBP16.79■□□□□ 0.28
COMMD3-205ENST00000463688 FKBP1BP68106 108 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 SAMD7Q7Z3H4 446 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 GMLQ99445 158 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 TLL2Q9Y6L7 1015 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 MYH3P11055 1940 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 SASH1O94885 1247 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 IL1R1P14778 569 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
COMMD3-205ENST00000463688 CA12O43570 354 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 PLIN1O60240 522 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 NPM3O75607 178 aaKnown RBP16.78■□□□□ 0.28
COMMD3-205ENST00000463688 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
COMMD3-205ENST00000463688 HIBADHP31937 336 aaKnown RBP16.78■□□□□ 0.28
COMMD3-205ENST00000463688 GTF2IP78347 998 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 SCARF1Q14162 830 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 EPHA10Q5JZY3 1008 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
COMMD3-205ENST00000463688 USP48Q86UV5 1035 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 TBC1D22AQ8WUA7 517 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
COMMD3-205ENST00000463688 ADAMTSL1Q8N6G6 1762 aa16.77■□□□□ 0.27
COMMD3-205ENST00000463688 FRAT2O75474 233 aaPredicted RBP16.77■□□□□ 0.27
COMMD3-205ENST00000463688 TAF5LO75529 589 aa16.77■□□□□ 0.27
COMMD3-205ENST00000463688 MS4A1P11836 297 aa16.77■□□□□ 0.27
COMMD3-205ENST00000463688 APOBEC3FQ8IUX4 373 aaKnown RBP16.77■□□□□ 0.27
COMMD3-205ENST00000463688 REM2Q8IYK8 340 aaPredicted RBP16.77■□□□□ 0.27
COMMD3-205ENST00000463688 CCDC102AQ96A19 550 aa16.77■□□□□ 0.27
COMMD3-205ENST00000463688 GLIS2Q9BZE0 524 aaPredicted RBP16.77■□□□□ 0.27
COMMD3-205ENST00000463688 RIPOR2Q9Y4F9 1068 aa16.77■□□□□ 0.27
COMMD3-205ENST00000463688 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
COMMD3-205ENST00000463688 WDR33Q9C0J8 1336 aaKnown RBP16.76■□□□□ 0.27
COMMD3-205ENST00000463688 PDE8BO95263 885 aa16.76■□□□□ 0.27
COMMD3-205ENST00000463688 VEGFBP49765 207 aa16.76■□□□□ 0.27
COMMD3-205ENST00000463688 PUM3Q15397 648 aaKnown RBP16.76■□□□□ 0.27
COMMD3-205ENST00000463688 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
COMMD3-205ENST00000463688 SAPCD2Q86UD0 394 aa16.76■□□□□ 0.27
COMMD3-205ENST00000463688 GGA3Q9NZ52 723 aa16.76■□□□□ 0.27
COMMD3-205ENST00000463688 TRAF5O00463 557 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 CIAO1O76071 339 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 DLGAP5Q15398 846 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 CST9Q5W186 159 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 HELBQ8NG08 1087 aaPredicted RBP16.75■□□□□ 0.27
COMMD3-205ENST00000463688 KAZALD1Q96I82 304 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 ZNF594Q96JF6 807 aaPredicted RBP16.75■□□□□ 0.27
COMMD3-205ENST00000463688 ZNF408Q9H9D4 720 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 GNL3LQ9NVN8 582 aaKnown RBP16.75■□□□□ 0.27
COMMD3-205ENST00000463688 SUGT1Q9Y2Z0 365 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 ZBED9Q6R2W3 1325 aa16.75■□□□□ 0.27
COMMD3-205ENST00000463688 TAF1P21675 1872 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
COMMD3-205ENST00000463688 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
COMMD3-205ENST00000463688 SLC5A1P13866 664 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 CTCFP49711 727 aaPredicted RBP16.74■□□□□ 0.27
COMMD3-205ENST00000463688 NOGQ13253 232 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 ANKRD44Q8N8A2 993 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 CAPNS2Q96L46 248 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 GBA2Q9HCG7 927 aaPredicted RBP16.74■□□□□ 0.27
COMMD3-205ENST00000463688 CEP126Q9P2H0 1117 aa16.74■□□□□ 0.27
COMMD3-205ENST00000463688 PPP2R3BQ9Y5P8 575 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms