RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 BICC1Q9H694 974 aaKnown RBP18.75■□□□□ 0.59
ATG4B-213ENST00000460211 ADARB2Q9NS39 739 aaKnown RBP18.75■□□□□ 0.59
ATG4B-213ENST00000460211 GPRC5DQ9NZD1 345 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 TLL2Q9Y6L7 1015 aa18.75■□□□□ 0.59
ATG4B-213ENST00000460211 COL4A1P02462 1669 aa18.74■□□□□ 0.59
ATG4B-213ENST00000460211 ECE2O60344 883 aa18.74■□□□□ 0.59
ATG4B-213ENST00000460211 UBTFL1P0CB47 393 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-213ENST00000460211 ATF7IPQ6VMQ6 1270 aa18.74■□□□□ 0.59
ATG4B-213ENST00000460211 KAZALD1Q96I82 304 aa18.74■□□□□ 0.59
ATG4B-213ENST00000460211 CNNM1Q9NRU3 951 aa18.74■□□□□ 0.59
ATG4B-213ENST00000460211 DUOX1Q9NRD9 1551 aa18.73■□□□□ 0.59
ATG4B-213ENST00000460211 YDJCA8MPS7 323 aa18.73■□□□□ 0.59
ATG4B-213ENST00000460211 CELF2O95319 508 aaKnown RBP18.73■□□□□ 0.59
ATG4B-213ENST00000460211 GMPSP49915 693 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-213ENST00000460211 CHRNDQ07001 517 aa18.73■□□□□ 0.59
ATG4B-213ENST00000460211 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-213ENST00000460211 ZKSCAN2Q63HK3 967 aa18.73■□□□□ 0.59
ATG4B-213ENST00000460211 INTS3Q68E01 1043 aaKnown RBP18.73■□□□□ 0.59
ATG4B-213ENST00000460211 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-213ENST00000460211 ZNF408Q9H9D4 720 aa18.72■□□□□ 0.59
ATG4B-213ENST00000460211 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
ATG4B-213ENST00000460211 TRIM27P14373 513 aa18.71■□□□□ 0.59
ATG4B-213ENST00000460211 PODNQ7Z5L7 613 aa18.71■□□□□ 0.59
ATG4B-213ENST00000460211 ZNF594Q96JF6 807 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-213ENST00000460211 MED23Q9ULK4 1368 aa18.7■□□□□ 0.58
ATG4B-213ENST00000460211 H7C1D1 291 aa18.7■□□□□ 0.58
ATG4B-213ENST00000460211 GNAI3P08754 354 aa18.7■□□□□ 0.58
ATG4B-213ENST00000460211 SAPCD2Q86UD0 394 aa18.7■□□□□ 0.58
ATG4B-213ENST00000460211 ANKRD44Q8N8A2 993 aa18.7■□□□□ 0.58
ATG4B-213ENST00000460211 COA1Q9GZY4 146 aa18.7■□□□□ 0.58
ATG4B-213ENST00000460211 PSMD14O00487 310 aa18.69■□□□□ 0.58
ATG4B-213ENST00000460211 RPS12P25398 132 aaKnown RBP18.69■□□□□ 0.58
ATG4B-213ENST00000460211 FTSJ3Q8IY81 847 aaKnown RBP18.69■□□□□ 0.58
ATG4B-213ENST00000460211 CLUAP1Q96AJ1 413 aa18.69■□□□□ 0.58
ATG4B-213ENST00000460211 SHTN1A0MZ66 631 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 PLIN1O60240 522 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 TAF5LO75529 589 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 MAP2K2P36507 400 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 HELBQ8NG08 1087 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-213ENST00000460211 TRPM4Q8TD43 1214 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 DPF2Q92785 391 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 MROH5Q6ZUA9 1318 aa18.68■□□□□ 0.58
ATG4B-213ENST00000460211 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
ATG4B-213ENST00000460211 HIRAP54198 1017 aaPredicted RBP18.67■□□□□ 0.58
ATG4B-213ENST00000460211 CNOT7Q9UIV1 285 aaKnown RBP18.67■□□□□ 0.58
ATG4B-213ENST00000460211 CASP8AP2Q9UKL3 1982 aa18.67■□□□□ 0.58
ATG4B-213ENST00000460211 USP17L3A6NCW0 530 aa18.66■□□□□ 0.58
ATG4B-213ENST00000460211 USP17L4A6NCW7 530 aa18.66■□□□□ 0.58
ATG4B-213ENST00000460211 WTIPA6NIX2 430 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-213ENST00000460211 MLLT1Q03111 559 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-213ENST00000460211 USP17L1Q7RTZ2 530 aa18.66■□□□□ 0.58
ATG4B-213ENST00000460211 MEIS3Q99687 375 aa18.66■□□□□ 0.58
ATG4B-213ENST00000460211 KCNQ5Q9NR82 932 aa18.66■□□□□ 0.58
ATG4B-213ENST00000460211 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
ATG4B-213ENST00000460211 RIPOR2Q9Y4F9 1068 aa18.66■□□□□ 0.58
ATG4B-213ENST00000460211 LRRFIP2Q9Y608 721 aaKnown RBP18.66■□□□□ 0.58
ATG4B-213ENST00000460211 UBE4AQ14139 1066 aa18.65■□□□□ 0.58
ATG4B-213ENST00000460211 DLK2Q6UY11 383 aa18.65■□□□□ 0.58
ATG4B-213ENST00000460211 C15orf52Q6ZUT6 534 aaKnown RBP18.65■□□□□ 0.58
ATG4B-213ENST00000460211 MICALL2Q8IY33 904 aa18.65■□□□□ 0.58
ATG4B-213ENST00000460211 DZIP1LQ8IYY4 767 aaKnown RBP18.65■□□□□ 0.58
ATG4B-213ENST00000460211 PUS3Q9BZE2 481 aaKnown RBP18.65■□□□□ 0.58
ATG4B-213ENST00000460211 PGAP2Q9UHJ9 254 aa18.65■□□□□ 0.58
ATG4B-213ENST00000460211 MS4A1P11836 297 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 METTL24Q5JXM2 366 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 RSBN1LQ6PCB5 846 aaPredicted RBP18.64■□□□□ 0.57
ATG4B-213ENST00000460211 ZNF804AQ7Z570 1209 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 USP48Q86UV5 1035 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 TXNRD3Q86VQ6 643 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 AGBL3Q8NEM8 1001 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 MCOLN1Q9GZU1 580 aa18.64■□□□□ 0.57
ATG4B-213ENST00000460211 SPEF2Q9C093 1822 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 SLC34A2O95436 690 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 GNAI2P04899 355 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 STRIP1Q5VSL9 837 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 CDC37L1Q7L3B6 337 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 TMEM57Q8N5G2 664 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 FBXW7Q969H0 707 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 ZIC5Q96T25 663 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 TNNQ9UQP3 1299 aa18.63■□□□□ 0.57
ATG4B-213ENST00000460211 SNAP23O00161 211 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 CA12O43570 354 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 KLRK1P26718 216 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 LRRC24Q50LG9 513 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 TTLL5Q6EMB2 1281 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 ZC3H15Q8WU90 426 aaKnown RBP18.62■□□□□ 0.57
ATG4B-213ENST00000460211 HHIPL1Q96JK4 782 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 CD209Q9NNX6 404 aa18.62■□□□□ 0.57
ATG4B-213ENST00000460211 MYO3BQ8WXR4 1341 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 EYA2O00167 538 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 HUNKP57058 714 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 PTPN12Q05209 780 aaKnown RBP18.61■□□□□ 0.57
ATG4B-213ENST00000460211 DGKZQ13574 1117 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 SAMD7Q7Z3H4 446 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 ITPRIPQ8IWB1 547 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 KLHDC4Q8TBB5 520 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
ATG4B-213ENST00000460211 PDE8BO95263 885 aa18.6■□□□□ 0.57
ATG4B-213ENST00000460211 RFX5P48382 616 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms