RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	WWC2	Q6AWC2	1192 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	PA2G4	Q9UQ80	394 aa	Known RBP	10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	MYO3B	Q8WXR4	1341 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	IQCA1	Q86XH1	822 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	DDX11	Q96FC9	970 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	CRAMP1	Q96RY5	1269 aa		10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.08	□□□□□ -0.8
HCG18-238	ENST00000449544	CCDC85C	A6NKD9	419 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	HOXD10	P28358	340 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	ZNF76	P36508	570 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	TANGO6	Q9C0B7	1094 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	NEURL1B	A8MQ27	555 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	SASH1	O94885	1247 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	SLC9C2	Q5TAH2	1124 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	SCLT1	Q96NL6	688 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	SPC25	Q9HBM1	224 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	VAMP4	O75379	141 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	DEFB115	Q30KQ5	88 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	BRDT	Q58F21	947 aa	Predicted RBP	10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	PPP4R3B	Q5MIZ7	849 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	MIGA1	Q8NAN2	632 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	KDM4A	O75164	1064 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	KRI1	Q8N9T8	703 aa	Known RBP	10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	FAM184A	Q8NB25	1140 aa		10.07	□□□□□ -0.8
HCG18-238	ENST00000449544	TIMM10	P62072	90 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	PIBF1	Q8WXW3	757 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	SLK	Q9H2G2	1235 aa	Predicted RBP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	IL27	Q8NEV9	243 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	MEIS3	Q99687	375 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	BCL9L	Q86UU0	1499 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	KDM5A	P29375	1690 aa	Known RBP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	MED1	Q15648	1581 aa	Predicted RBP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	MAGEB6P1	A0A0J9YX57	407 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	XBP1	P17861	261 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	UBE4A	Q14139	1066 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	CHADL	Q6NUI6	762 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	GPHN	Q9NQX3	736 aa	Predicted RBP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	SAP30BP	Q9UHR5	308 aa	Known RBP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	VWDE	Q8N2E2	1590 aa		10.06	□□□□□ -0.8
HCG18-238	ENST00000449544	RARS	P54136	660 aa	Known RBP	10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	GGA3	Q9NZ52	723 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	ATP6V0A2	Q9Y487	856 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	MROH1	Q8NDA8	1641 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	TOMM70	O94826	608 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	ARHGEF10L	Q9HCE6	1279 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	ADARB2	Q9NS39	739 aa	Known RBP	10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	REC8	O95072	547 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	TSPY3	P0CV98	308 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	TSPY8	P0CW00	308 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	RRP1	P56182	461 aa	Known RBP	10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	KLHDC4	Q8TBB5	520 aa		10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	RNF41	Q9H4P4	317 aa	Predicted RBP	10.05	□□□□□ -0.8
HCG18-238	ENST00000449544	CAMTA2	O94983	1202 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	BECN1	Q14457	450 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	CELF1	Q92879	486 aa	Known RBP	10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	NCAPD2	Q15021	1401 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	CCDC69	A6NI79	296 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	CCNA1	P78396	465 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	NMRK2	Q9NPI5	230 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	SLC4A4	Q9Y6R1	1079 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544		A0A1B0GUL7	405 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	SAFB	Q15424	915 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	IMMT	Q16891	758 aa	Known RBP	10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	CFAP100	Q494V2	611 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	CUL5	Q93034	780 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	MAGEB6	Q8N7X4	407 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	CSRNP1	Q96S65	589 aa		10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	SEC63	Q9UGP8	760 aa	Known RBP	10.04	□□□□□ -0.8
HCG18-238	ENST00000449544	TFCP2	Q12800	502 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	TAF1C	Q15572	869 aa	Predicted RBP	10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	ANGEL2	Q5VTE6	544 aa	Known RBP	10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	BRMS1	Q9HCU9	246 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	GCC1	Q96CN9	775 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	CCDC34	Q96HJ3	373 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	GBA2	Q9HCG7	927 aa	Predicted RBP	10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	PPP4R2	Q9NY27	417 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	POLR1A	O95602	1720 aa	Predicted RBP	10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	SAMD7	Q7Z3H4	446 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	CERS3	Q8IU89	383 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	VAT1L	Q9HCJ6	419 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	ECHDC1	Q9NTX5	307 aa		10.03	□□□□□ -0.8
HCG18-238	ENST00000449544	LTBP4	Q8N2S1	1624 aa		10.02	□□□□□ -0.8
HCG18-238	ENST00000449544	SREBF2	Q12772	1141 aa		10.02	□□□□□ -0.8
HCG18-238	ENST00000449544	RAET1E	Q8TD07	263 aa		10.02	□□□□□ -0.8
HCG18-238	ENST00000449544	OSBP	P22059	807 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	MAPKAPK5	Q8IW41	473 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	BSDC1	Q9NW68	430 aa	Predicted RBP	10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	TRPM1	Q7Z4N2	1603 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	SRGN	P10124	158 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	TRIM27	P14373	513 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	AAMP	Q13685	434 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	INTS5	Q6P9B9	1019 aa	Known RBP	10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	MIGA2	Q7L4E1	593 aa		10.02	□□□□□ -0.81
HCG18-238	ENST00000449544	DPP9	Q86TI2	863 aa		10.02	□□□□□ -0.81

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