RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MPHOSPH8Q99549 860 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 LRRC4BQ9NT99 713 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 LMBRD1Q9NUN5 540 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 HMG20BQ9P0W2 317 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 COL9A3Q14050 684 aaPredicted RBP19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 BCL11BQ9C0K0 894 aaPredicted RBP19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
AP000253.1-201ENST00000449339 C4BP0C0L5 1744 aa19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 AKAP11Q9UKA4 1901 aa19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 ZPR1O75312 459 aa19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 MROH5Q6ZUA9 1318 aa19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 MCAMP43121 646 aa19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 CCDC24Q8N4L8 307 aa19.23■□□□□ 0.67
AP000253.1-201ENST00000449339 TSGA10IPQ3SY00 556 aa19.22■□□□□ 0.67
AP000253.1-201ENST00000449339 TICAM2Q86XR7 235 aa19.22■□□□□ 0.67
AP000253.1-201ENST00000449339 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
AP000253.1-201ENST00000449339 RNF113AO15541 343 aaKnown RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 LARGE1O95461 756 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 PHKA1P46020 1223 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 ZMYM1Q5SVZ6 1142 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 FAM196AQ6ZSG2 479 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 CHAMP1Q96JM3 812 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 ZSCAN31Q96LW9 406 aaPredicted RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 SH2B1Q9NRF2 756 aaPredicted RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 FGFR2P21802 821 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 GTF2E1P29083 439 aaPredicted RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 IGHMBP2P38935 993 aaKnown RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 PUM3Q15397 648 aaKnown RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 BLOC1S2Q6QNY1 142 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 C4AP0C0L4 1744 aa19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 WDR33Q9C0J8 1336 aaKnown RBP19.21■□□□□ 0.67
AP000253.1-201ENST00000449339 RTL9Q8NET4 1388 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 KRT27Q7Z3Y8 459 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 SETDB2Q96T68 719 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 M0R2C6 588 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 TRIM37O94972 964 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 CCDC102BQ68D86 513 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 LPIN2Q92539 896 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 HELLSQ9NRZ9 838 aa19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 ISY1Q9ULR0 285 aaKnown RBP19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 U3KPZ7 1027 aaPredicted RBP19.2■□□□□ 0.66
AP000253.1-201ENST00000449339 MAST3O60307 1309 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 SMC3Q9UQE7 1217 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 ARAP2Q8WZ64 1704 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 XRCC6P12956 609 aaKnown RBP eCLIP19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 RPS6KB1P23443 525 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 KRT32Q14532 448 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 ME3Q16798 604 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 NBPF5PQ86XG9 351 aaPredicted RBP19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 CCDC83Q8IWF9 413 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 OSBP2Q969R2 916 aa19.19■□□□□ 0.66
AP000253.1-201ENST00000449339 COL24A1Q17RW2 1714 aa19.18■□□□□ 0.66
AP000253.1-201ENST00000449339 TRAPPC3LQ5T215 181 aa19.18■□□□□ 0.66
AP000253.1-201ENST00000449339 TPCN1Q9ULQ1 816 aa19.18■□□□□ 0.66
AP000253.1-201ENST00000449339 MYH7P12883 1935 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 RFC4P35249 363 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 CHRNDQ07001 517 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 ANKRD1Q15327 319 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 SF3B3Q15393 1217 aaKnown RBP19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 RGL2O15211 777 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 SLC5A1P13866 664 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 MRE11P49959 708 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 TCEANC2Q96MN5 208 aa19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 ALDH8A1Q9H2A2 487 aaPredicted RBP19.17■□□□□ 0.66
AP000253.1-201ENST00000449339 CYP21A2P08686 494 aa19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 NCLP19338 710 aaKnown RBP19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 SLC10A5Q5PT55 438 aa19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 CDC5LQ99459 802 aaKnown RBP19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 PIH1D3Q9NQM4 214 aaKnown RBP19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 A0A0G2JLW4 131 aa19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 WTIPA6NIX2 430 aaPredicted RBP19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 SYT1P21579 422 aa19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 ARID4AP29374 1257 aaPredicted RBP19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 WASHC4Q2M389 1173 aa19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 ZNF512BQ96KM6 892 aaPredicted RBP19.16■□□□□ 0.66
AP000253.1-201ENST00000449339 STX6O43752 255 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 ST3GAL1Q11201 340 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 GAS2L3Q86XJ1 694 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 ANKRD18AQ8IVF6 992 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 CELF1Q92879 486 aaKnown RBP19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 NYXQ9GZU5 481 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 HSPD1P10809 573 aaKnown RBP19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 GJB2P29033 226 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 CAVIN1Q6NZI2 390 aaKnown RBP19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 GPT2Q8TD30 523 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 NEK1Q96PY6 1258 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 DSCC1Q9BVC3 393 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 GRPEL1Q9HAV7 217 aa19.15■□□□□ 0.66
AP000253.1-201ENST00000449339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 DTNBO60941 627 aa19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 BCAMP50895 628 aa19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 TOB2Q14106 344 aaPredicted RBP19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 LRRFIP1Q32MZ4 808 aaKnown RBP19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 NECAB1Q8N987 351 aa19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 PUS7LQ9H0K6 701 aaKnown RBP19.14■□□□□ 0.65
AP000253.1-201ENST00000449339 UBR3Q6ZT12 1888 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms