RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 IFNL1Q8IU54 200 aa18.13■□□□□ 0.49
SHANK2-209ENST00000445654 ANKRD18AQ8IVF6 992 aa18.13■□□□□ 0.49
SHANK2-209ENST00000445654 STRIP1Q5VSL9 837 aa18.12■□□□□ 0.49
SHANK2-209ENST00000445654 R3HDMLQ9H3Y0 253 aa18.12■□□□□ 0.49
SHANK2-209ENST00000445654 MED23Q9ULK4 1368 aa18.12■□□□□ 0.49
SHANK2-209ENST00000445654 PPP1R12BO60237 982 aaPredicted RBP18.11■□□□□ 0.49
SHANK2-209ENST00000445654 PDE8AO60658 829 aa18.11■□□□□ 0.49
SHANK2-209ENST00000445654 NBPF11Q86T75 865 aa18.11■□□□□ 0.49
SHANK2-209ENST00000445654 EFCC1Q9HA90 598 aa18.11■□□□□ 0.49
SHANK2-209ENST00000445654 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
SHANK2-209ENST00000445654 ANGEL1Q9UNK9 670 aaKnown RBP18.11■□□□□ 0.49
SHANK2-209ENST00000445654 LAMB1P07942 1786 aa18.1■□□□□ 0.49
SHANK2-209ENST00000445654 COL4A1P02462 1669 aa18.1■□□□□ 0.49
SHANK2-209ENST00000445654 DACT2Q5SW24 774 aa18.1■□□□□ 0.49
SHANK2-209ENST00000445654 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
SHANK2-209ENST00000445654 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
SHANK2-209ENST00000445654 SCAF8Q9UPN6 1271 aaKnown RBP18.1■□□□□ 0.49
SHANK2-209ENST00000445654 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
SHANK2-209ENST00000445654 PRKG1Q13976 671 aa18.09■□□□□ 0.49
SHANK2-209ENST00000445654 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
SHANK2-209ENST00000445654 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
SHANK2-209ENST00000445654 COA1Q9GZY4 146 aa18.09■□□□□ 0.49
SHANK2-209ENST00000445654 PPP2R3BQ9Y5P8 575 aa18.09■□□□□ 0.49
SHANK2-209ENST00000445654 PCCAP05165 728 aaPredicted RBP18.08■□□□□ 0.48
SHANK2-209ENST00000445654 EN2P19622 333 aaPredicted RBP18.08■□□□□ 0.48
SHANK2-209ENST00000445654 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.48
SHANK2-209ENST00000445654 FBXW7Q969H0 707 aa18.08■□□□□ 0.48
SHANK2-209ENST00000445654 COLQQ9Y215 455 aaPredicted RBP18.08■□□□□ 0.48
SHANK2-209ENST00000445654 CHL1O00533 1208 aa18.07■□□□□ 0.48
SHANK2-209ENST00000445654 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
SHANK2-209ENST00000445654 SP3Q02447 781 aa18.07■□□□□ 0.48
SHANK2-209ENST00000445654 CD99L2Q8TCZ2 262 aa18.07■□□□□ 0.48
SHANK2-209ENST00000445654 WNK4Q96J92 1243 aa18.07■□□□□ 0.48
SHANK2-209ENST00000445654 MKI67P46013 3256 aaKnown RBP18.06■□□□□ 0.48
SHANK2-209ENST00000445654 SASH1O94885 1247 aa18.06■□□□□ 0.48
SHANK2-209ENST00000445654 SUPT20HL1Q3ZLR7 823 aa18.06■□□□□ 0.48
SHANK2-209ENST00000445654 HTTP42858 3142 aa18.06■□□□□ 0.48
SHANK2-209ENST00000445654 IGF2BP3O00425 579 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHANK2-209ENST00000445654 CWC25Q9NXE8 425 aaPredicted RBP18.05■□□□□ 0.48
SHANK2-209ENST00000445654 IREB2P48200 963 aaKnown RBP18.04■□□□□ 0.48
SHANK2-209ENST00000445654 CCT4P50991 539 aaKnown RBP18.04■□□□□ 0.48
SHANK2-209ENST00000445654 CRHR2Q13324 411 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 SLC9C1Q4G0N8 1177 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 TTLL5Q6EMB2 1281 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 ZNF333Q96JL9 665 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 CHMP4AQ9BY43 222 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 DEFB129Q9H1M3 183 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 BSDC1Q9NW68 430 aaPredicted RBP18.04■□□□□ 0.48
SHANK2-209ENST00000445654 LEMD3Q9Y2U8 911 aa18.04■□□□□ 0.48
SHANK2-209ENST00000445654 KIAA0100Q14667 2235 aaKnown RBP18.03■□□□□ 0.48
SHANK2-209ENST00000445654 MYO1BO43795 1136 aa18.03■□□□□ 0.48
SHANK2-209ENST00000445654 WDHD1O75717 1129 aaPredicted RBP18.03■□□□□ 0.48
SHANK2-209ENST00000445654 DLGAP5Q15398 846 aa18.03■□□□□ 0.48
SHANK2-209ENST00000445654 SLC4A8Q2Y0W8 1093 aa18.03■□□□□ 0.48
SHANK2-209ENST00000445654 LAS1LQ9Y4W2 734 aaKnown RBP18.03■□□□□ 0.48
SHANK2-209ENST00000445654 ZNF646O15015 1829 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-209ENST00000445654 KRT24Q2M2I5 525 aa18.02■□□□□ 0.48
SHANK2-209ENST00000445654 ZBED3Q96IU2 234 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-209ENST00000445654 MYD88Q99836 296 aa18.02■□□□□ 0.48
SHANK2-209ENST00000445654 MINPP1Q9UNW1 487 aa18.02■□□□□ 0.48
SHANK2-209ENST00000445654 TESPA1A2RU30 521 aaPredicted RBP18.01■□□□□ 0.47
SHANK2-209ENST00000445654 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
SHANK2-209ENST00000445654 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
SHANK2-209ENST00000445654 ANKRD13AQ8IZ07 590 aa18.01■□□□□ 0.47
SHANK2-209ENST00000445654 MTMR14Q8NCE2 650 aa18.01■□□□□ 0.47
SHANK2-209ENST00000445654 CCDC85AQ96PX6 553 aaPredicted RBP18.01■□□□□ 0.47
SHANK2-209ENST00000445654 ZNF804BA4D1E1 1349 aa18■□□□□ 0.47
SHANK2-209ENST00000445654 ECM29Q5VYK3 1845 aa18■□□□□ 0.47
SHANK2-209ENST00000445654 CTSWP56202 376 aa18■□□□□ 0.47
SHANK2-209ENST00000445654 MXD3Q9BW11 206 aa18■□□□□ 0.47
SHANK2-209ENST00000445654 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
SHANK2-209ENST00000445654 ZBTB4Q9P1Z0 1013 aaPredicted RBP18■□□□□ 0.47
SHANK2-209ENST00000445654 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
SHANK2-209ENST00000445654 CLMNQ96JQ2 1002 aa17.99■□□□□ 0.47
SHANK2-209ENST00000445654 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
SHANK2-209ENST00000445654 H0YGN5 161 aa17.98■□□□□ 0.47
SHANK2-209ENST00000445654 DLL1O00548 723 aa17.98■□□□□ 0.47
SHANK2-209ENST00000445654 IGHMBP2P38935 993 aaKnown RBP17.98■□□□□ 0.47
SHANK2-209ENST00000445654 OTUD5Q96G74 571 aa17.98■□□□□ 0.47
SHANK2-209ENST00000445654 CENPFP49454 3210 aa17.98■□□□□ 0.47
SHANK2-209ENST00000445654 GNRH1P01148 92 aa17.97■□□□□ 0.47
SHANK2-209ENST00000445654 PRMT2P55345 433 aa17.97■□□□□ 0.47
SHANK2-209ENST00000445654 GTF2IP78347 998 aa17.97■□□□□ 0.47
SHANK2-209ENST00000445654 KIF22Q14807 665 aa17.97■□□□□ 0.47
SHANK2-209ENST00000445654 METTL22Q9BUU2 404 aaPredicted RBP17.97■□□□□ 0.47
SHANK2-209ENST00000445654 MYH3P11055 1940 aa17.97■□□□□ 0.47
SHANK2-209ENST00000445654 TNFAIP1Q13829 316 aa17.96■□□□□ 0.47
SHANK2-209ENST00000445654 TAF1CQ15572 869 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-209ENST00000445654 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
SHANK2-209ENST00000445654 SLC17A8Q8NDX2 589 aa17.96■□□□□ 0.47
SHANK2-209ENST00000445654 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
SHANK2-209ENST00000445654 FZD1Q9UP38 647 aa17.96■□□□□ 0.47
SHANK2-209ENST00000445654 PTCH2Q9Y6C5 1203 aa17.96■□□□□ 0.47
SHANK2-209ENST00000445654 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.46
SHANK2-209ENST00000445654 SPEF2Q9C093 1822 aa17.95■□□□□ 0.46
SHANK2-209ENST00000445654 KCNJ4P48050 445 aa17.95■□□□□ 0.46
SHANK2-209ENST00000445654 CHRDL2Q6WN34 429 aa17.95■□□□□ 0.46
SHANK2-209ENST00000445654 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
SHANK2-209ENST00000445654 USP2O75604 605 aaPredicted RBP17.94■□□□□ 0.46
SHANK2-209ENST00000445654 GTF2A2P52657 109 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms