RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SH2B1Q9NRF2 756 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P31-201ENST00000437242 TMEM63CQ9P1W3 806 aa7.08□□□□□ -1.28
HMGB1P31-201ENST00000437242 KANSL3Q9P2N6 904 aa7.08□□□□□ -1.28
HMGB1P31-201ENST00000437242 COBLO75128 1261 aa7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 TGFB1P01137 390 aa7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 ADAMTSL4Q6UY14 1074 aa7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 KIAA1211Q6ZU35 1233 aa7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 UBASH3BQ8TF42 649 aa7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 FOXD4L4Q8WXT5 416 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 PBXIP1Q96AQ6 731 aa7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 FAM46AQ96IP4 442 aaKnown RBP7.07□□□□□ -1.28
HMGB1P31-201ENST00000437242 H3BRJ5 948 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 ADAM11O75078 769 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 PCSK2P16519 638 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 NFIAQ12857 509 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 ATCAYQ86WG3 371 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 KRTAP1-3Q8IUG1 177 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 POP1Q99575 1024 aaKnown RBP7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 KRTAP4-12Q9BQ66 201 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 ADAM19Q9H013 955 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 C7orf69Q9H7B7 122 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 SEPT3Q9UH03 358 aa7.06□□□□□ -1.28
HMGB1P31-201ENST00000437242 KIAA1324LA8MWY0 1029 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 TM4SF5O14894 197 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 DDX3YO15523 660 aaKnown RBP7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 SART1O43290 800 aaKnown RBP7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 GRIK1P39086 918 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 PIP4K2BP78356 416 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 TTC16Q8NEE8 873 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 EDEM1Q92611 657 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 WNT8BQ93098 351 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 CCDC97Q96F63 343 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 KLHDC7BQ96G42 594 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 MYRFLQ96LU7 910 aa7.05□□□□□ -1.28
HMGB1P31-201ENST00000437242 CES1P23141 567 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 ZDHHC13Q8IUH4 622 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 TRIM42Q8IWZ5 723 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 CNTN3Q9P232 1028 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 SLAIN2Q9P270 581 aa7.04□□□□□ -1.28
HMGB1P31-201ENST00000437242 HMX2A2RU54 273 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 MED26O95402 600 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 ACPPP15309 386 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 IRAK1P51617 712 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 NLRP12P59046 1061 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 DNM1Q05193 864 aaKnown RBP7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 RNF43Q68DV7 783 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 ANKRD34AQ69YU3 496 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 HELQQ8TDG4 1101 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 RNF208Q9H0X6 261 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 KCNF1Q9H3M0 494 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 OSGEPQ9NPF4 335 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 SALL4Q9UJQ4 1053 aa7.03□□□□□ -1.28
HMGB1P31-201ENST00000437242 PDE2AO00408 941 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 PAX4O43316 350 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 PREPP48147 710 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 FDX2Q6P4F2 183 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 INTS5Q6P9B9 1019 aaKnown RBP7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 FAM20CQ8IXL6 584 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 C1orf127Q8N9H9 656 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 SLC7A3Q8WY07 619 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 RUSC1Q9BVN2 902 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 COL17A1Q9UMD9 1497 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P31-201ENST00000437242 PDGFAP04085 211 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 BMP3P12645 472 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 ARL4DP49703 201 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 GP2P55259 537 aaKnown RBP7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 C8orf34Q49A92 452 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 NOM1Q5C9Z4 860 aaKnown RBP7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 XKR5Q6UX68 686 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 BEND4Q6ZU67 534 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 CLEC10AQ8IUN9 316 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
HMGB1P31-201ENST00000437242 A6NHS1 94 aa7□□□□□ -1.29
HMGB1P31-201ENST00000437242 GAS2O43903 313 aaKnown RBP7□□□□□ -1.29
HMGB1P31-201ENST00000437242 PMEPA1Q969W9 287 aa7□□□□□ -1.29
HMGB1P31-201ENST00000437242 FAM83CQ9BQN1 747 aa7□□□□□ -1.29
HMGB1P31-201ENST00000437242 SERPINA10Q9UK55 444 aa7□□□□□ -1.29
HMGB1P31-201ENST00000437242 HIF3AQ9Y2N7 669 aa7□□□□□ -1.29
HMGB1P31-201ENST00000437242 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7□□□□□ -1.29
HMGB1P31-201ENST00000437242 NFKBIEO00221 500 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 TRPA1O75762 1119 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 SPINK2P20155 84 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 MPSTP25325 297 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 MZF1P28698 734 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 HHIPQ96QV1 700 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 GGNBP2Q9H3C7 697 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 GOLGA2P5Q9HBQ8 144 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 SOX13Q9UN79 622 aa6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 OAS3Q9Y6K5 1087 aaKnown RBP6.99□□□□□ -1.29
HMGB1P31-201ENST00000437242 EIF1AXP47813 144 aaKnown RBP6.98□□□□□ -1.29
HMGB1P31-201ENST00000437242 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P31-201ENST00000437242 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
HMGB1P31-201ENST00000437242 CHRDQ9H2X0 955 aa6.98□□□□□ -1.29
HMGB1P31-201ENST00000437242 PRR19A6NJB7 356 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms