RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 HDAC9Q9UKV0 1011 aa12.42□□□□□ -0.42
NOD1-206ENST00000434755 CTSWP56202 376 aa12.42□□□□□ -0.42
NOD1-206ENST00000434755 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
NOD1-206ENST00000434755 CRACR2BQ8N4Y2 399 aaPredicted RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 MAP2P11137 1827 aaKnown RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 CIAO1O76071 339 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 BAG4O95429 457 aaKnown RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 ZHX3Q9H4I2 956 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 JAG2Q9Y219 1238 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 TPM2P07951 284 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 TM6SF1Q9BZW5 370 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 HELLSQ9NRZ9 838 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 MAST3O60307 1309 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 LRRC2Q9BYS8 371 aa12.41□□□□□ -0.42
NOD1-206ENST00000434755 NSFL1CQ9UNZ2 370 aaKnown RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 CHD2O14647 1828 aaKnown RBP12.41□□□□□ -0.42
NOD1-206ENST00000434755 H0YIN7 160 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
NOD1-206ENST00000434755 SOGA3Q5TF21 947 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 SGSM2O43147 1006 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 TNNI3KQ59H18 835 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 TTLL7Q6ZT98 887 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 IQCA1Q86XH1 822 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 FPGT-TNNI3KV9GXZ4 949 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
NOD1-206ENST00000434755 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
NOD1-206ENST00000434755 ABCC6O95255 1503 aa12.4□□□□□ -0.43
NOD1-206ENST00000434755 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
NOD1-206ENST00000434755 ZSCAN16Q9H4T2 348 aaPredicted RBP12.39□□□□□ -0.43
NOD1-206ENST00000434755 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
NOD1-206ENST00000434755 MON2Q7Z3U7 1717 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 HCLS1P14317 486 aaPredicted RBP12.39□□□□□ -0.43
NOD1-206ENST00000434755 TIMM10P62072 90 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 TFCP2Q12800 502 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 MTX1Q13505 466 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 HOMER1Q86YM7 354 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 FAM43AQ8N2R8 423 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 IPO7O95373 1038 aaKnown RBP12.39□□□□□ -0.43
NOD1-206ENST00000434755 CAVIN2O95810 425 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
NOD1-206ENST00000434755 STX6O43752 255 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 PDILTQ8N807 584 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
NOD1-206ENST00000434755 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 SSFA2P28290 1259 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 PDE4BQ07343 736 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 CCDC171Q6TFL3 1326 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 MYO1BO43795 1136 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 TMED8Q6PL24 325 aaPredicted RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 OLFM4Q6UX06 510 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 ZNF444Q8N0Y2 327 aaPredicted RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 ATP5JP18859 108 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 POLA2Q14181 598 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 TMTC2Q8N394 836 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 GGA1Q9UJY5 639 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 A0A1B0GUL7 405 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 CTAGE5O15320 804 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 RNF113AO15541 343 aaKnown RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 NAA16Q6N069 864 aaPredicted RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 CNKSR1Q969H4 720 aa12.38□□□□□ -0.43
NOD1-206ENST00000434755 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
NOD1-206ENST00000434755 TRIM37O94972 964 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 RGL2O15211 777 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 KRT18P05783 430 aaKnown RBP12.37□□□□□ -0.43
NOD1-206ENST00000434755 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
NOD1-206ENST00000434755 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 KRT23Q9C075 422 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 NARFQ9UHQ1 456 aa12.37□□□□□ -0.43
NOD1-206ENST00000434755 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 GSPT1P15170 499 aaKnown RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 OGFOD1Q8N543 542 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 NCOA7Q8NI08 942 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 ZSCAN22P10073 491 aaPredicted RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 ATP2B4P23634 1241 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 HIBADHP31937 336 aaKnown RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 HSPA4P34932 840 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 TXLNAP40222 546 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
NOD1-206ENST00000434755 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
NOD1-206ENST00000434755 TRAF1Q13077 416 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms