RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CWC25Q9NXE8 425 aaPredicted RBP16.26■□□□□ 0.19
SGCE-203ENST00000425444 TAF1P21675 1872 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
SGCE-203ENST00000425444 C6orf229H3BNL8 230 aa16.25■□□□□ 0.19
SGCE-203ENST00000425444 NEXNQ0ZGT2 675 aa16.25■□□□□ 0.19
SGCE-203ENST00000425444 SCARF1Q14162 830 aa16.25■□□□□ 0.19
SGCE-203ENST00000425444 TMC4Q7Z404 712 aa16.25■□□□□ 0.19
SGCE-203ENST00000425444 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
SGCE-203ENST00000425444 NSFL1CQ9UNZ2 370 aaKnown RBP16.25■□□□□ 0.19
SGCE-203ENST00000425444 TTLL12Q14166 644 aaPredicted RBP16.24■□□□□ 0.19
SGCE-203ENST00000425444 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
SGCE-203ENST00000425444 TRIM17Q9Y577 477 aa16.24■□□□□ 0.19
SGCE-203ENST00000425444 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
SGCE-203ENST00000425444 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
SGCE-203ENST00000425444 FLIIQ13045 1269 aa16.23■□□□□ 0.19
SGCE-203ENST00000425444 FKBP5Q13451 457 aaPredicted RBP16.23■□□□□ 0.19
SGCE-203ENST00000425444 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
SGCE-203ENST00000425444 G2E3Q7L622 706 aa16.23■□□□□ 0.19
SGCE-203ENST00000425444 VAMP4O75379 141 aa16.22■□□□□ 0.19
SGCE-203ENST00000425444 VIL1P09327 827 aaKnown RBP16.22■□□□□ 0.19
SGCE-203ENST00000425444 EN2P19622 333 aaPredicted RBP16.22■□□□□ 0.19
SGCE-203ENST00000425444 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
SGCE-203ENST00000425444 POLLQ9UGP5 575 aa16.22■□□□□ 0.19
SGCE-203ENST00000425444 SCAF8Q9UPN6 1271 aaKnown RBP16.22■□□□□ 0.19
SGCE-203ENST00000425444 CCDC152Q4G0S7 254 aa16.21■□□□□ 0.19
SGCE-203ENST00000425444 OTOP1Q7RTM1 612 aa16.21■□□□□ 0.19
SGCE-203ENST00000425444 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.19
SGCE-203ENST00000425444 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
SGCE-203ENST00000425444 EYA3Q99504 573 aa16.21■□□□□ 0.19
SGCE-203ENST00000425444 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
SGCE-203ENST00000425444 PDE8AO60658 829 aa16.2■□□□□ 0.18
SGCE-203ENST00000425444 IGKV5-2P06315 115 aa16.2■□□□□ 0.18
SGCE-203ENST00000425444 ZNF280AP59817 542 aaPredicted RBP16.2■□□□□ 0.18
SGCE-203ENST00000425444 CWF19L2Q2TBE0 894 aaKnown RBP16.2■□□□□ 0.18
SGCE-203ENST00000425444 PRAMEF18Q5VWM3 479 aa16.2■□□□□ 0.18
SGCE-203ENST00000425444 SCN9AQ15858 1988 aa16.2■□□□□ 0.18
SGCE-203ENST00000425444 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 NEURL1BA8MQ27 555 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 G3V3G9 751 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 GPSM2P81274 684 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 DCAF8Q5TAQ9 597 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 DNAAF4Q8WXU2 420 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
SGCE-203ENST00000425444 LAMA3Q16787 3333 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
SGCE-203ENST00000425444 RBBP6Q7Z6E9 1792 aaKnown RBP16.18■□□□□ 0.18
SGCE-203ENST00000425444 CCER2I3L3R5 266 aa16.18■□□□□ 0.18
SGCE-203ENST00000425444 ALDH1A1P00352 501 aa16.18■□□□□ 0.18
SGCE-203ENST00000425444 ZC3H12CQ9C0D7 883 aaKnown RBP16.18■□□□□ 0.18
SGCE-203ENST00000425444 RPS8P62241 208 aaKnown RBP16.17■□□□□ 0.18
SGCE-203ENST00000425444 RSBN1LQ6PCB5 846 aaPredicted RBP16.17■□□□□ 0.18
SGCE-203ENST00000425444 AGBL3Q8NEM8 1001 aa16.17■□□□□ 0.18
SGCE-203ENST00000425444 MYOZ2Q9NPC6 264 aa16.17■□□□□ 0.18
SGCE-203ENST00000425444 SEC31BQ9NQW1 1179 aa16.17■□□□□ 0.18
SGCE-203ENST00000425444 COL4A1P02462 1669 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 E9PSI1 815 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 USP17L8P0C7I0 530 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 NF2P35240 595 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 CTSWP56202 376 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 TBC1D16Q8TBP0 767 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 ARMC5Q96C12 935 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 TMEM106CQ9BVX2 250 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 PTPN22Q9Y2R2 807 aa16.16■□□□□ 0.18
SGCE-203ENST00000425444 H0YGN5 161 aa16.15■□□□□ 0.18
SGCE-203ENST00000425444 PTPN12Q05209 780 aaKnown RBP16.15■□□□□ 0.18
SGCE-203ENST00000425444 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
SGCE-203ENST00000425444 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
SGCE-203ENST00000425444 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
SGCE-203ENST00000425444 F6X3S4 739 aa16.14■□□□□ 0.17
SGCE-203ENST00000425444 PRKG1Q13976 671 aa16.14■□□□□ 0.17
SGCE-203ENST00000425444 GCKRQ14397 625 aa16.14■□□□□ 0.17
SGCE-203ENST00000425444 OTUD5Q96G74 571 aa16.14■□□□□ 0.17
SGCE-203ENST00000425444 CDC5LQ99459 802 aaKnown RBP16.14■□□□□ 0.17
SGCE-203ENST00000425444 NBPF9Q3BBW0 867 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 SPRYD7Q5W111 196 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 ARMC9Q7Z3E5 817 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 CD99L2Q8TCZ2 262 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 ERO1AQ96HE7 468 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 ANKIB1Q9P2G1 1089 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
SGCE-203ENST00000425444 H7C1W4 665 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 UFL1O94874 794 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 IFNL1Q8IU54 200 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 TTLL11Q8NHH1 800 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 GMLQ99445 158 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 GREM2Q9H772 168 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 EFCC1Q9HA90 598 aa16.12■□□□□ 0.17
SGCE-203ENST00000425444 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
SGCE-203ENST00000425444 MANSC4A6NHS7 340 aaPredicted RBP16.11■□□□□ 0.17
SGCE-203ENST00000425444 INHBEP58166 350 aa16.11■□□□□ 0.17
SGCE-203ENST00000425444 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
SGCE-203ENST00000425444 GGA1Q9UJY5 639 aa16.11■□□□□ 0.17
SGCE-203ENST00000425444 ZNF609O15014 1411 aa16.11■□□□□ 0.17
SGCE-203ENST00000425444 MYH3P11055 1940 aa16.1■□□□□ 0.17
SGCE-203ENST00000425444 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
SGCE-203ENST00000425444 BEND3Q5T5X7 828 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms