RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 C11orf91Q3C1V1 193 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 MSL1Q68DK7 614 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 KRT25Q7Z3Z0 450 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 COL26A1Q96A83 441 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 FRRS1LQ9P0K9 344 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 ZFATQ9P243 1243 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 USP21Q9UK80 565 aa7.49□□□□□ -1.21
ATG4AP1-201ENST00000416893 PHLDB1Q86UU1 1377 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 ARAP3Q8WWN8 1544 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 ZBTB42B2RXF5 422 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 PTCD1O75127 700 aaKnown RBP7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 GRIK5Q16478 980 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 PERM1Q5SV97 790 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 DHX32Q7L7V1 743 aaKnown RBP7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 TRPM4Q8TD43 1214 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 PSMG3-AS1Q96PY0 264 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 CFAP74Q9C0B2 1584 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 C11orf16Q9NQ32 467 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 CXXC1Q9P0U4 656 aaPredicted RBP7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 FANCAO15360 1455 aa7.48□□□□□ -1.21
ATG4AP1-201ENST00000416893 MTUS2Q5JR59 1369 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 PLCH2O75038 1416 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 MICAL2O94851 1124 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 TARSP26639 723 aaKnown RBP7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 ARTNQ5T4W7 220 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 ELMSAN1Q6PJG2 1045 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 DTWD1Q8N5C7 304 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 TP53INP1Q96A56 240 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 IFT43Q96FT9 208 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 ZFP64Q9NPA5 681 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 EHBP1L1Q8N3D4 1523 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 CDC42BPAQ5VT25 1732 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 CDC42BPBQ9Y5S2 1711 aa7.47□□□□□ -1.21
ATG4AP1-201ENST00000416893 TIAM1Q13009 1591 aa7.46□□□□□ -1.21
ATG4AP1-201ENST00000416893 AKNAQ7Z591 1439 aa7.46□□□□□ -1.21
ATG4AP1-201ENST00000416893 PREX2Q70Z35 1606 aa7.46□□□□□ -1.21
ATG4AP1-201ENST00000416893 SASH3O75995 380 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 RARAP10276 462 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 GPLD1P80108 840 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 MLLT1Q03111 559 aaPredicted RBP7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 C16orf46Q6P387 395 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 FBXO11Q86XK2 927 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 ARHGAP5Q13017 1502 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 FRMPD1Q5SYB0 1578 aa7.46□□□□□ -1.22
ATG4AP1-201ENST00000416893 RICTORQ6R327 1708 aa7.45□□□□□ -1.22
ATG4AP1-201ENST00000416893 PLAURQ03405 335 aa7.45□□□□□ -1.22
ATG4AP1-201ENST00000416893 WFDC8Q8IUA0 241 aa7.45□□□□□ -1.22
ATG4AP1-201ENST00000416893 TTC9Q92623 222 aa7.45□□□□□ -1.22
ATG4AP1-201ENST00000416893 DENND4BO75064 1496 aaPredicted RBP7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 ADGRL1O94910 1474 aa7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 RAPGEF3O95398 923 aa7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 ATP2B4P23634 1241 aa7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 COX20Q5RI15 118 aa7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 EFCAB2Q5VUJ9 269 aa7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
ATG4AP1-201ENST00000416893 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 OPLAHO14841 1288 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 BRD2P25440 801 aaKnown RBP7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 NRLP54845 237 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 MKNK1Q9BUB5 465 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 SMG9Q9H0W8 520 aaKnown RBP7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 USP20Q9Y2K6 914 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 SUPT6HQ7KZ85 1726 aaKnown RBP7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 CCNB3Q8WWL7 1395 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 POGZQ7Z3K3 1410 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 SCAPERQ9BY12 1400 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 LRRC9Q6ZRR7 1453 aa7.43□□□□□ -1.22
ATG4AP1-201ENST00000416893 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 EGFRP00533 1210 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 HFE2Q6ZVN8 426 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 TREML1Q86YW5 311 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 NCOA2Q15596 1464 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 ABCC1P33527 1531 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 ZMYM4Q5VZL5 1548 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 ARHGEF40Q8TER5 1519 aa7.42□□□□□ -1.22
ATG4AP1-201ENST00000416893 EIF2AK2P19525 551 aaKnown RBP7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 NOS3P29474 1203 aa7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 LRP8Q14114 963 aa7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 NBPF11Q86T75 865 aa7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 FAM13BQ9NYF5 915 aa7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 ITSN2Q9NZM3 1697 aa7.41□□□□□ -1.22
ATG4AP1-201ENST00000416893 XYLBO75191 536 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 DEAF1O75398 565 aaPredicted RBP7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 RGL4Q8IZJ4 473 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 CMTR1Q8N1G2 835 aaKnown RBP7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 SAP130Q9H0E3 1048 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 ZNF518AQ6AHZ1 1483 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 SYCP2Q9BX26 1530 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 ARHGEF12Q9NZN5 1544 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 KDM5CP41229 1560 aa7.4□□□□□ -1.22
ATG4AP1-201ENST00000416893 SAMD9LQ8IVG5 1584 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms