RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	CC2D2B	Q6DHV5	1058 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TYW1B	Q6NUM6	668 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TTLL7	Q6ZT98	887 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	KRT26	Q7Z3Y9	468 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	RASAL3	Q86YV0	1011 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ZC3H15	Q8WU90	426 aa	Known RBP	11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	RPGR	Q92834	1020 aa	Known RBP	11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	PHACTR3	Q96KR7	559 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	ZNF652	Q9Y2D9	606 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	TAF1	P21675	1872 aa		11.71	□□□□□ -0.53
NIF3L1-206	ENST00000416651	SZT2	Q5T011	3432 aa		11.71	□□□□□ -0.54
NIF3L1-206	ENST00000416651	RIC1	Q4ADV7	1423 aa		11.7	□□□□□ -0.54
NIF3L1-206	ENST00000416651	GNAT3	A8MTJ3	354 aa		11.7	□□□□□ -0.54
NIF3L1-206	ENST00000416651	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.7	□□□□□ -0.54
NIF3L1-206	ENST00000416651	GCC1	Q96CN9	775 aa		11.7	□□□□□ -0.54
NIF3L1-206	ENST00000416651	CRAMP1	Q96RY5	1269 aa		11.7	□□□□□ -0.54
NIF3L1-206	ENST00000416651	NUP98	P52948	1817 aa		11.7	□□□□□ -0.54
NIF3L1-206	ENST00000416651	CEMIP	Q8WUJ3	1361 aa		11.69	□□□□□ -0.54
NIF3L1-206	ENST00000416651	C2orf69	Q8N8R5	385 aa		11.69	□□□□□ -0.54
NIF3L1-206	ENST00000416651	CCDC102A	Q96A19	550 aa		11.69	□□□□□ -0.54
NIF3L1-206	ENST00000416651	ZNF428	Q96B54	188 aa		11.69	□□□□□ -0.54
NIF3L1-206	ENST00000416651	ABCC4	O15439	1325 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	DUOX1	Q9NRD9	1551 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	PSMD14	O00487	310 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	DLL1	O00548	723 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	NTSR2	O95665	410 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	DCTN1	Q14203	1278 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	RBM17	Q96I25	401 aa	Known RBP	11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	MIS18A	Q9NYP9	233 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	HDAC9	Q9UKV0	1011 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	ATP6V0A2	Q9Y487	856 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	COL4A1	P02462	1669 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	TRIOBP	Q9H2D6	2365 aa		11.68	□□□□□ -0.54
NIF3L1-206	ENST00000416651	PAPPA2	Q9BXP8	1791 aa		11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651	KIF7	Q2M1P5	1343 aa		11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651	DIAPH1	O60610	1272 aa	Known RBP	11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651	KIAA2012	Q0VF49	1180 aa		11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651	MCM10	Q7L590	875 aa		11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651	ZBTB3	Q9H5J0	574 aa		11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.67	□□□□□ -0.54
NIF3L1-206	ENST00000416651		H7C1D1	291 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	GPR25	O00155	361 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	SNRPA1	P09661	255 aa	Known RBP	11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	EN2	P19622	333 aa	Predicted RBP	11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	CAP1	Q01518	475 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	PRAMEF18	Q5VWM3	479 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	CDCA5	Q96FF9	252 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	DBNDD1	Q9H9R9	158 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	HTT	P42858	3142 aa		11.66	□□□□□ -0.54
NIF3L1-206	ENST00000416651	COL3A1	P02461	1466 aa	Predicted RBP	11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	UBE2Q2L	H0YL09	131 aa		11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	U2SURP	O15042	1029 aa	Known RBP	11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	CNGB1	Q14028	1251 aa	Predicted RBP	11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	DPP8	Q6V1X1	898 aa	Predicted RBP	11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	ZNF34	Q8IZ26	560 aa		11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	MPND	Q8N594	471 aa		11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	GGA3	Q9NZ52	723 aa		11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	RRP7A	Q9Y3A4	280 aa	Known RBP	11.65	□□□□□ -0.54
NIF3L1-206	ENST00000416651	RTL9	Q8NET4	1388 aa		11.65	□□□□□ -0.55
NIF3L1-206	ENST00000416651	LAMB2	P55268	1798 aa		11.64	□□□□□ -0.55
NIF3L1-206	ENST00000416651	TNIP1	Q15025	636 aa		11.64	□□□□□ -0.55
NIF3L1-206	ENST00000416651	NYX	Q9GZU5	481 aa		11.64	□□□□□ -0.55
NIF3L1-206	ENST00000416651	KIAA0100	Q14667	2235 aa	Known RBP	11.64	□□□□□ -0.55
NIF3L1-206	ENST00000416651	MAP3K15	Q6ZN16	1313 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	CDHR2	Q9BYE9	1310 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	HSPA5	P11021	654 aa	Known RBP	11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	HCLS1	P14317	486 aa	Predicted RBP	11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	MYL6B	P14649	208 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	PKN2	Q16513	984 aa	Known RBP	11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	C6orf132	Q5T0Z8	1188 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SP8	Q8IXZ3	490 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SPRYD3	Q8NCJ5	442 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	GAS2L2	Q8NHY3	880 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	DCPS	Q96C86	337 aa	Known RBP	11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SCN9A	Q15858	1988 aa		11.63	□□□□□ -0.55
NIF3L1-206	ENST00000416651	CEP290	O15078	2479 aa		11.62	□□□□□ -0.55
NIF3L1-206	ENST00000416651	GRIPAP1	Q4V328	841 aa		11.62	□□□□□ -0.55
NIF3L1-206	ENST00000416651	THUMPD2	Q9BTF0	503 aa	Known RBP	11.62	□□□□□ -0.55
NIF3L1-206	ENST00000416651	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.62	□□□□□ -0.55
NIF3L1-206	ENST00000416651	BRCA2	P51587	3418 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	ERVV-1	B6SEH8	477 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	PRKAR2B	P31323	418 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	LAPTM4A	Q15012	233 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	KIF4B	Q2VIQ3	1234 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	CC2D1B	Q5T0F9	858 aa	Known RBP	11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	ANGEL2	Q5VTE6	544 aa	Known RBP	11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	SUPT20H	Q8NEM7	779 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	DPF2	Q92785	391 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	EPAS1	Q99814	870 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	VPS33B	Q9H267	617 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	TSR3	Q9UJK0	312 aa	Known RBP	11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	FZD1	Q9UP38	647 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	KNSTRN	Q9Y448	316 aa		11.61	□□□□□ -0.55
NIF3L1-206	ENST00000416651	CENPF	P49454	3210 aa		11.6	□□□□□ -0.55
NIF3L1-206	ENST00000416651	TRIM6-TRIM34	B2RNG4	842 aa		11.6	□□□□□ -0.55
NIF3L1-206	ENST00000416651	DPYSL4	O14531	572 aa		11.6	□□□□□ -0.55
NIF3L1-206	ENST00000416651	NLRP3	Q96P20	1036 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms