RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 FOXP2O15409 715 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 HMGN5P82970 282 aaKnown RBP18.71■□□□□ 0.59
HOXD3-202ENST00000410016 TTLL5Q6EMB2 1281 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 FBXL16Q8N461 479 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
HOXD3-202ENST00000410016 PDIA3P30101 505 aaKnown RBP18.7■□□□□ 0.58
HOXD3-202ENST00000410016 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 ANO6Q4KMQ2 910 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 ZNF274Q96GC6 653 aaPredicted RBP18.7■□□□□ 0.58
HOXD3-202ENST00000410016 KCNF1Q9H3M0 494 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 CBX8Q9HC52 389 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 RCOR1Q9UKL0 485 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 LAMA4Q16363 1823 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 ADORA1P30542 326 aa18.7■□□□□ 0.58
HOXD3-202ENST00000410016 CCT2P78371 535 aaKnown RBP18.7■□□□□ 0.58
HOXD3-202ENST00000410016 NCOA5Q9HCD5 579 aaKnown RBP18.7■□□□□ 0.58
HOXD3-202ENST00000410016 EVCP57679 992 aa18.69■□□□□ 0.58
HOXD3-202ENST00000410016 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
HOXD3-202ENST00000410016 C17orf53Q8N3J3 647 aaPredicted RBP18.69■□□□□ 0.58
HOXD3-202ENST00000410016 BICD2Q8TD16 824 aa18.69■□□□□ 0.58
HOXD3-202ENST00000410016 XAGE2Q96GT9 111 aa18.69■□□□□ 0.58
HOXD3-202ENST00000410016 CSF1RP07333 972 aa18.69■□□□□ 0.58
HOXD3-202ENST00000410016 CHST3Q7LGC8 479 aa18.69■□□□□ 0.58
HOXD3-202ENST00000410016 PLA2G12BQ9BX93 195 aa18.69■□□□□ 0.58
HOXD3-202ENST00000410016 HSPA2P54652 639 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 CCDC158Q5M9N0 1113 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 SPEF2Q9C093 1822 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 PCCAP05165 728 aaPredicted RBP18.68■□□□□ 0.58
HOXD3-202ENST00000410016 SCARF1Q14162 830 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 KIAA1524Q8TCG1 905 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 FAM89AQ96GI7 184 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 AKAP2Q9Y2D5 859 aa18.68■□□□□ 0.58
HOXD3-202ENST00000410016 FTOQ9C0B1 505 aaKnown RBP eCLIP18.67■□□□□ 0.58
HOXD3-202ENST00000410016 PDCL3Q9H2J4 239 aa18.67■□□□□ 0.58
HOXD3-202ENST00000410016 SHANK3Q9BYB0 1731 aa18.67■□□□□ 0.58
HOXD3-202ENST00000410016 FDPSP14324 419 aaKnown RBP18.67■□□□□ 0.58
HOXD3-202ENST00000410016 CEBPZQ03701 1054 aaKnown RBP18.67■□□□□ 0.58
HOXD3-202ENST00000410016 ILDR1Q86SU0 546 aaPredicted RBP18.67■□□□□ 0.58
HOXD3-202ENST00000410016 SPC24Q8NBT2 197 aa18.67■□□□□ 0.58
HOXD3-202ENST00000410016 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
HOXD3-202ENST00000410016 DYNC1I1O14576 645 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 TPM3P06753 285 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 TTC39AQ5SRH9 613 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 ZBTB38Q8NAP3 1195 aaPredicted RBP18.66■□□□□ 0.58
HOXD3-202ENST00000410016 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 KIF3AQ9Y496 699 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 FGAP02671 866 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
HOXD3-202ENST00000410016 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 DNAJC10Q8IXB1 793 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 TDRD7Q8NHU6 1098 aaKnown RBP18.66■□□□□ 0.58
HOXD3-202ENST00000410016 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
HOXD3-202ENST00000410016 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
HOXD3-202ENST00000410016 PYCARDQ9ULZ3 195 aa18.66■□□□□ 0.58
HOXD3-202ENST00000410016 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
HOXD3-202ENST00000410016 RBM10P98175 930 aaKnown RBP18.65■□□□□ 0.58
HOXD3-202ENST00000410016 SNW1Q13573 536 aaKnown RBP18.65■□□□□ 0.58
HOXD3-202ENST00000410016 VSIG10Q8N0Z9 540 aa18.65■□□□□ 0.58
HOXD3-202ENST00000410016 ZAP70P43403 619 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 ZNF165P49910 485 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 FOSBP53539 338 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 LRRFIP1Q32MZ4 808 aaKnown RBP18.64■□□□□ 0.58
HOXD3-202ENST00000410016 GORABQ5T7V8 394 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 SYNE4Q8N205 404 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 PIGBQ92521 554 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 PUS7LQ9H0K6 701 aaKnown RBP18.64■□□□□ 0.58
HOXD3-202ENST00000410016 CTNNA3Q9UI47 895 aa18.64■□□□□ 0.58
HOXD3-202ENST00000410016 ZNF330Q9Y3S2 320 aaPredicted RBP18.64■□□□□ 0.58
HOXD3-202ENST00000410016 IFIT5Q13325 482 aaKnown RBP18.64■□□□□ 0.57
HOXD3-202ENST00000410016 DNTTIP2Q5QJE6 756 aaKnown RBP18.64■□□□□ 0.57
HOXD3-202ENST00000410016 PLA2G4DQ86XP0 818 aa18.64■□□□□ 0.57
HOXD3-202ENST00000410016 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
HOXD3-202ENST00000410016 DNAJC25Q9H1X3 360 aa18.64■□□□□ 0.57
HOXD3-202ENST00000410016 GOLPH3LQ9H4A5 285 aa18.64■□□□□ 0.57
HOXD3-202ENST00000410016 RIPOR2Q9Y4F9 1068 aa18.64■□□□□ 0.57
HOXD3-202ENST00000410016 GOLGA6L6A8MZA4 724 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 CCAR1Q8IX12 1150 aaKnown RBP18.63■□□□□ 0.57
HOXD3-202ENST00000410016 ENGASEQ8NFI3 743 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 MYRIPQ8NFW9 859 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 EVA1CP58658 441 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 HAND2P61296 217 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 APPBP2Q92624 585 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 PRIMPOLQ96LW4 560 aa18.63■□□□□ 0.57
HOXD3-202ENST00000410016 CAVIN2O95810 425 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 GUCY1B3Q02153 619 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 IMMTQ16891 758 aaKnown RBP18.62■□□□□ 0.57
HOXD3-202ENST00000410016 GIGYF2Q6Y7W6 1299 aaKnown RBP18.62■□□□□ 0.57
HOXD3-202ENST00000410016 KIF6Q6ZMV9 814 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 MB21D2Q8IYB1 491 aaPredicted RBP18.62■□□□□ 0.57
HOXD3-202ENST00000410016 CHMP4CQ96CF2 233 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 FAM13BQ9NYF5 915 aa18.62■□□□□ 0.57
HOXD3-202ENST00000410016 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
HOXD3-202ENST00000410016 TOGARAM1Q9Y4F4 1720 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms