RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 CDH23Q9H251 3354 aa11.17□□□□□ -0.62
GPN1-202ENST00000407583 MANSC4A6NHS7 340 aaPredicted RBP11.16□□□□□ -0.62
GPN1-202ENST00000407583 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
GPN1-202ENST00000407583 NFKBIBQ15653 356 aa11.16□□□□□ -0.62
GPN1-202ENST00000407583 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
GPN1-202ENST00000407583 FAM161BQ96MY7 647 aa11.16□□□□□ -0.62
GPN1-202ENST00000407583 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
GPN1-202ENST00000407583 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
GPN1-202ENST00000407583 INHBEP58166 350 aa11.15□□□□□ -0.63
GPN1-202ENST00000407583 PRKG1Q13976 671 aa11.15□□□□□ -0.63
GPN1-202ENST00000407583 C8orf34Q49A92 452 aa11.15□□□□□ -0.63
GPN1-202ENST00000407583 ABCC4O15439 1325 aa11.14□□□□□ -0.63
GPN1-202ENST00000407583 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 FARP2O94887 1054 aaPredicted RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 GJA8P48165 433 aa11.14□□□□□ -0.63
GPN1-202ENST00000407583 CNGB1Q14028 1251 aaPredicted RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 TDHQ8IZJ6 230 aa11.14□□□□□ -0.63
GPN1-202ENST00000407583 MAFAQ8NHW3 353 aaPredicted RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
GPN1-202ENST00000407583 RGL2O15211 777 aa11.13□□□□□ -0.63
GPN1-202ENST00000407583 CT47B1P0C2W7 299 aaPredicted RBP11.13□□□□□ -0.63
GPN1-202ENST00000407583 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
GPN1-202ENST00000407583 FMNL2Q96PY5 1086 aa11.13□□□□□ -0.63
GPN1-202ENST00000407583 USP16Q9Y5T5 823 aa11.13□□□□□ -0.63
GPN1-202ENST00000407583 ZNF646O15015 1829 aaPredicted RBP11.12□□□□□ -0.63
GPN1-202ENST00000407583 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
GPN1-202ENST00000407583 LDLRAD1Q5T700 205 aa11.12□□□□□ -0.63
GPN1-202ENST00000407583 L1TD1Q5T7N2 865 aaKnown RBP11.12□□□□□ -0.63
GPN1-202ENST00000407583 SP8Q8IXZ3 490 aa11.12□□□□□ -0.63
GPN1-202ENST00000407583 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
GPN1-202ENST00000407583 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
GPN1-202ENST00000407583 ECE2O60344 883 aa11.11□□□□□ -0.63
GPN1-202ENST00000407583 ZNF280AP59817 542 aaPredicted RBP11.11□□□□□ -0.63
GPN1-202ENST00000407583 FAM43AQ8N2R8 423 aa11.11□□□□□ -0.63
GPN1-202ENST00000407583 PTPN18Q99952 460 aa11.11□□□□□ -0.63
GPN1-202ENST00000407583 ARHGAP39Q9C0H5 1083 aa11.11□□□□□ -0.63
GPN1-202ENST00000407583 ZMYND8Q9ULU4 1186 aaPredicted RBP11.11□□□□□ -0.63
GPN1-202ENST00000407583 ZSWIM8A7E2V4 1837 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 KCNQ3O43525 872 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 PLIN1O60240 522 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 GJB1P08034 283 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
GPN1-202ENST00000407583 NF2P35240 595 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 ARHGEF6Q15052 776 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 CCDC27Q2M243 656 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 WASHC4Q2M389 1173 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
GPN1-202ENST00000407583 ARMC9Q7Z3E5 817 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 WNK4Q96J92 1243 aa11.1□□□□□ -0.63
GPN1-202ENST00000407583 SALL2Q9Y467 1007 aaPredicted RBP11.1□□□□□ -0.63
GPN1-202ENST00000407583 IBTKQ9P2D0 1353 aaPredicted RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 VIL1P09327 827 aaKnown RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 GPTP24298 496 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 MAGEA10P43363 369 aaPredicted RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 OTUD7BQ6GQQ9 843 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 CLMNQ96JQ2 1002 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 MYOZ2Q9NPC6 264 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 ANGEL1Q9UNK9 670 aaKnown RBP11.09□□□□□ -0.63
GPN1-202ENST00000407583 PIEZO1Q92508 2521 aa11.09□□□□□ -0.63
GPN1-202ENST00000407583 LAMB1P07942 1786 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 CCL5P13501 91 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 U2AF1L4Q8WU68 220 aaKnown RBP11.08□□□□□ -0.64
GPN1-202ENST00000407583 SLC10A4Q96EP9 437 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 CDX2Q99626 313 aaPredicted RBP11.08□□□□□ -0.64
GPN1-202ENST00000407583 RSPH6AQ9H0K4 717 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 SSC5DA1L4H1 1573 aa11.08□□□□□ -0.64
GPN1-202ENST00000407583 TAF1P21675 1872 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 BBOX1O75936 387 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 NTSR2O95665 410 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 SYN1P17600 705 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 GJA5P36382 358 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 NBPF9Q3BBW0 867 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 ALYREFQ86V81 257 aaKnown RBP11.07□□□□□ -0.64
GPN1-202ENST00000407583 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 RNF208Q9H0X6 261 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 ALPK3Q96L96 1907 aa11.07□□□□□ -0.64
GPN1-202ENST00000407583 SCN9AQ15858 1988 aa11.06□□□□□ -0.64
GPN1-202ENST00000407583 TEFQ10587 303 aa11.06□□□□□ -0.64
GPN1-202ENST00000407583 C20orf194Q5TEA3 1177 aa11.06□□□□□ -0.64
GPN1-202ENST00000407583 UBE2OQ9C0C9 1292 aaKnown RBP11.06□□□□□ -0.64
GPN1-202ENST00000407583 PTMSP20962 102 aa11.05□□□□□ -0.64
GPN1-202ENST00000407583 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
GPN1-202ENST00000407583 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
GPN1-202ENST00000407583 DDX60Q8IY21 1712 aaKnown RBP11.05□□□□□ -0.64
GPN1-202ENST00000407583 COL2A1P02458 1487 aaPredicted RBP11.05□□□□□ -0.64
GPN1-202ENST00000407583 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms