RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 BABAM1Q9NWV8 329 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 PODXL2Q9NZ53 605 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 ADAMTS8Q9UP79 889 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 PRUNE2Q8WUY3 3088 aa8.08□□□□□ -1.12
RPA3-204ENST00000406109 PAPPA2Q9BXP8 1791 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 WTIPA6NIX2 430 aaPredicted RBP8.07□□□□□ -1.12
RPA3-204ENST00000406109 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 TM4SF4P48230 202 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 RPS8P62241 208 aaKnown RBP8.07□□□□□ -1.12
RPA3-204ENST00000406109 FKBP1BP68106 108 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 NOM1Q5C9Z4 860 aaKnown RBP8.07□□□□□ -1.12
RPA3-204ENST00000406109 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
RPA3-204ENST00000406109 CCDC146Q8IYE0 955 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 CHPF2Q9P2E5 772 aa8.07□□□□□ -1.12
RPA3-204ENST00000406109 MAPK8IP3Q9UPT6 1336 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 ZNF646O15015 1829 aaPredicted RBP8.06□□□□□ -1.12
RPA3-204ENST00000406109 UBE2Q2LH0YL09 131 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 GPR25O00155 361 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 CHL1O00533 1208 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 RIPK4P57078 832 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 TRIM28Q13263 835 aaKnown RBP8.06□□□□□ -1.12
RPA3-204ENST00000406109 RTL5Q5HYW3 569 aaPredicted RBP8.06□□□□□ -1.12
RPA3-204ENST00000406109 PRAMEF18Q5VWM3 479 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 ANKRD13DQ6ZTN6 518 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 AGBL3Q8NEM8 1001 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 PLBD2Q8NHP8 589 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 EYA3Q99504 573 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 MRS2Q9HD23 443 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 MYOZ2Q9NPC6 264 aa8.06□□□□□ -1.12
RPA3-204ENST00000406109 PITPNM2Q9BZ72 1349 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 MUC3AQ02505 3323 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 POTEB2H3BUK9 544 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 IRS4O14654 1257 aaPredicted RBP8.05□□□□□ -1.12
RPA3-204ENST00000406109 UFL1O94874 794 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 TMPOP42166 694 aaKnown RBP8.05□□□□□ -1.12
RPA3-204ENST00000406109 NEUROD2Q15784 382 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 NBPF9Q3BBW0 867 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 HABP4Q5JVS0 413 aaKnown RBP8.05□□□□□ -1.12
RPA3-204ENST00000406109 FBXO46Q6PJ61 603 aaPredicted RBP8.05□□□□□ -1.12
RPA3-204ENST00000406109 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 CFHR5Q9BXR6 569 aa8.05□□□□□ -1.12
RPA3-204ENST00000406109 ZC3H12CQ9C0D7 883 aaKnown RBP8.05□□□□□ -1.12
RPA3-204ENST00000406109 SPTBN5Q9NRC6 3674 aaKnown RBP8.05□□□□□ -1.12
RPA3-204ENST00000406109 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
RPA3-204ENST00000406109 MXD3Q9BW11 206 aa8.04□□□□□ -1.12
RPA3-204ENST00000406109 ANKIB1Q9P2G1 1089 aa8.04□□□□□ -1.12
RPA3-204ENST00000406109 GGA1Q9UJY5 639 aa8.04□□□□□ -1.12
RPA3-204ENST00000406109 HDAC9Q9UKV0 1011 aa8.04□□□□□ -1.12
RPA3-204ENST00000406109 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 WNT10BO00744 389 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 CAP1Q01518 475 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
RPA3-204ENST00000406109 MKRN3Q13064 507 aaKnown RBP8.03□□□□□ -1.12
RPA3-204ENST00000406109 DACT2Q5SW24 774 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 DIEXFQ68CQ4 756 aaKnown RBP8.03□□□□□ -1.12
RPA3-204ENST00000406109 ZBTB38Q8NAP3 1195 aaPredicted RBP8.03□□□□□ -1.12
RPA3-204ENST00000406109 OTUD5Q96G74 571 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 MS4A3Q96HJ5 214 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 TRIM35Q9UPQ4 493 aa8.03□□□□□ -1.12
RPA3-204ENST00000406109 USP17L3A6NCW0 530 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 USP17L4A6NCW7 530 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 FKTNO75072 461 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 LDLRAD1Q5T700 205 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 HDGFL1Q5TGJ6 251 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 USP17L1Q7RTZ2 530 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 PODNQ7Z5L7 613 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 FAM9BQ8IZU0 186 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 JARID2Q92833 1246 aaPredicted RBP8.02□□□□□ -1.13
RPA3-204ENST00000406109 GCC1Q96CN9 775 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 ZBED3Q96IU2 234 aaPredicted RBP8.02□□□□□ -1.13
RPA3-204ENST00000406109 DBF4Q9UBU7 674 aaPredicted RBP8.02□□□□□ -1.13
RPA3-204ENST00000406109 FZD1Q9UP38 647 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 CDH23Q9H251 3354 aa8.02□□□□□ -1.13
RPA3-204ENST00000406109 APAF1O14727 1248 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 HOXB7P09629 217 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 FXR1P51114 621 aaKnown RBP eCLIP8.01□□□□□ -1.13
RPA3-204ENST00000406109 SPRYD7Q5W111 196 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 OTOP1Q7RTM1 612 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 TXNRD3Q86VQ6 643 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 HYPKQ9NX55 129 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 LAMB1P07942 1786 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 RBBP6Q7Z6E9 1792 aaKnown RBP8.01□□□□□ -1.13
RPA3-204ENST00000406109 XDHP47989 1333 aa8.01□□□□□ -1.13
RPA3-204ENST00000406109 G3V3G9 751 aa8□□□□□ -1.13
RPA3-204ENST00000406109 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
RPA3-204ENST00000406109 PDE8AO60658 829 aa8□□□□□ -1.13
RPA3-204ENST00000406109 PCCAP05165 728 aaPredicted RBP8□□□□□ -1.13
RPA3-204ENST00000406109 LMOD3Q0VAK6 560 aa8□□□□□ -1.13
RPA3-204ENST00000406109 SREBF2Q12772 1141 aa8□□□□□ -1.13
RPA3-204ENST00000406109 CCDC152Q4G0S7 254 aa8□□□□□ -1.13
RPA3-204ENST00000406109 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
RPA3-204ENST00000406109 DUSP27Q5VZP5 1158 aa8□□□□□ -1.13
RPA3-204ENST00000406109 IFNL1Q8IU54 200 aa8□□□□□ -1.13
RPA3-204ENST00000406109 CCDC85AQ96PX6 553 aaPredicted RBP8□□□□□ -1.13
RPA3-204ENST00000406109 TSPYL2Q9H2G4 693 aaPredicted RBP8□□□□□ -1.13
RPA3-204ENST00000406109 PHAXQ9H814 394 aaKnown RBP8□□□□□ -1.13
RPA3-204ENST00000406109 MINPP1Q9UNW1 487 aa8□□□□□ -1.13
RPA3-204ENST00000406109 LAS1LQ9Y4W2 734 aaKnown RBP8□□□□□ -1.13
RPA3-204ENST00000406109 MED23Q9ULK4 1368 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms