RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 FGRP09769 529 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 PSMD2Q13200 908 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 SF3B2Q13435 895 aaKnown RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZNF394Q53GI3 561 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 EYA1Q99502 592 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 MKNK1Q9BUB5 465 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 RBCK1Q9BYM8 510 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 TSR3Q9UJK0 312 aaKnown RBP6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 EMILIN1Q9Y6C2 1016 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 USP19O94966 1318 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 COL18A1P39060 1754 aa6.92□□□□□ -1.3
HMGB3P7-201ENST00000400214 LMO7Q8WWI1 1683 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 RGPD5Q99666 1765 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 PER1O15534 1290 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 LGR5O75473 907 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 ADAMTS2O95450 1211 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 PDGFRBP09619 1106 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 MAPK8P45983 427 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 TMF1P82094 1093 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 C11orf96Q7Z7L8 435 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 RDH13Q8NBN7 331 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 NGLY1Q96IV0 654 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 PCDHGB7Q9Y5F8 929 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 TTC21AQ8NDW8 1320 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 KTN1Q86UP2 1357 aaKnown RBP6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 ATRNO75882 1429 aa6.91□□□□□ -1.3
HMGB3P7-201ENST00000400214 LTN1O94822 1766 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 KIF20BQ96Q89 1820 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 FAM83GA6ND36 823 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 ZBBXA8MT70 800 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 CLEC4GQ6UXB4 293 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 NLRP13Q86W25 1043 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 ABTB2Q8N961 1025 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 PLPP7Q8NBV4 271 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 PKNOX2Q96KN3 472 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 SLC12A5Q9H2X9 1139 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 KIAA1468Q9P260 1216 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 FAM198AQ9UFP1 575 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 DDX41Q9UJV9 622 aaKnown RBP6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 WWC3Q9ULE0 1092 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 TTF2Q9UNY4 1162 aaKnown RBP6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 KIAA1024Q9UPX6 916 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 RPS6KL1Q9Y6S9 549 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 TTC21BQ7Z4L5 1316 aa6.9□□□□□ -1.3
HMGB3P7-201ENST00000400214 CPDO75976 1380 aa6.9□□□□□ -1.31
HMGB3P7-201ENST00000400214 USP31Q70CQ4 1352 aa6.9□□□□□ -1.31
HMGB3P7-201ENST00000400214 EDC4Q6P2E9 1401 aaKnown RBP6.9□□□□□ -1.31
HMGB3P7-201ENST00000400214 BRWD3Q6RI45 1802 aa6.9□□□□□ -1.31
HMGB3P7-201ENST00000400214 PRSS12P56730 875 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 USP46P62068 366 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 RBM6P78332 1123 aaKnown RBP6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 CBLBQ13191 982 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 UNC5CLQ8IV45 518 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 QTRT2Q9H974 415 aaKnown RBP6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 GNL3LQ9NVN8 582 aaKnown RBP6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 USP21Q9UK80 565 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 TRPC5Q9UL62 973 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 HPS5Q9UPZ3 1129 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 A0A1W2PP64 1363 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 ANKRD36BQ8N2N9 1353 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 ABCC6O95255 1503 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 GLI3P10071 1580 aa6.89□□□□□ -1.31
HMGB3P7-201ENST00000400214 NFAT5O94916 1531 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 WDHD1O75717 1129 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 GCP02774 474 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 HSPA5P11021 654 aaKnown RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 RXRBP28702 533 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 ZEB1P37275 1124 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 EVA1CP58658 441 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 SERINC3Q13530 473 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 DSC3Q14574 896 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 FAM98CQ17RN3 349 aaKnown RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 PLEKHG4Q58EX7 1191 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 TJAP1Q5JTD0 557 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 ODR4Q5SWX8 454 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 HDGFL2Q7Z4V5 671 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 ZNF654Q8IZM8 581 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 CDCA7LQ96GN5 454 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 SEPT9Q9UHD8 586 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 EP400Q96L91 3159 aa6.88□□□□□ -1.31
HMGB3P7-201ENST00000400214 MAP2P11137 1827 aaKnown RBP6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 ANKRD26Q9UPS8 1709 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 CAMTA1Q9Y6Y1 1673 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 OVOS2A0A0J9YW53 1432 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 OVOS2Q6IE36 1432 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 KIAA0232Q92628 1395 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 C6orf229H3BNL8 230 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 PPP1R12AO14974 1030 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 VPS72Q15906 364 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 ENOX2Q16206 610 aaKnown RBP6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 NUTM2GQ5VZR2 741 aa6.87□□□□□ -1.31
HMGB3P7-201ENST00000400214 VPS37DQ86XT2 251 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms