RNA–Protein interactions for RNA: ENST00000398849.6

AC005562.1-202, humanhuman

TSL 2

Gene AC005562.1, Length 1,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005562.1-202ENST00000398849 PROX2Q3B8N5 592 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 NLRP10Q86W26 655 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 CCDC146Q8IYE0 955 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 NGEFQ8N5V2 710 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 ISCA1Q9BUE6 129 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 TK2O00142 265 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 DDNO94850 711 aaPredicted RBP11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 RPGRQ92834 1020 aaKnown RBP11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 TAF1P21675 1872 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 PASKQ96RG2 1323 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 BBOX1O75936 387 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 CLCN1P35523 988 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 GNAI1P63096 354 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 KRT24Q2M2I5 525 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 GPC2Q8N158 579 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 SYNE4Q8N205 404 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 NLRP7Q8WX94 980 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 CHMP4AQ9BY43 222 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 TAF1DQ9H5J8 278 aaPredicted RBP11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 ATP6V0A2Q9Y487 856 aa11.18□□□□□ -0.62
AC005562.1-202ENST00000398849 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 ANXA1P04083 346 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 SF3B3Q15393 1217 aaKnown RBP11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 DUSP27Q5VZP5 1158 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 OLFM4Q6UX06 510 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 TMC4Q7Z404 712 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 PACS2Q86VP3 889 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 LDHDQ86WU2 507 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 ZNF277Q9NRM2 450 aaPredicted RBP11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 CHPF2Q9P2E5 772 aa11.17□□□□□ -0.62
AC005562.1-202ENST00000398849 DUOX1Q9NRD9 1551 aa11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 ABCC4O15439 1325 aa11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 APAF1O14727 1248 aa11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 PPEF1O14829 653 aaPredicted RBP11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 SP8Q8IXZ3 490 aa11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 GPCPD1Q9NPB8 672 aa11.16□□□□□ -0.62
AC005562.1-202ENST00000398849 MYH3P11055 1940 aa11.15□□□□□ -0.62
AC005562.1-202ENST00000398849 C3orf80F5H4A9 247 aa11.15□□□□□ -0.62
AC005562.1-202ENST00000398849 NUDT18Q6ZVK8 323 aa11.15□□□□□ -0.62
AC005562.1-202ENST00000398849 PNMA8AQ86V59 439 aaPredicted RBP11.15□□□□□ -0.62
AC005562.1-202ENST00000398849 TRPM7Q96QT4 1865 aa11.15□□□□□ -0.63
AC005562.1-202ENST00000398849 CDHR2Q9BYE9 1310 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 ITGBL1O95965 494 aaPredicted RBP11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 GRAPQ13588 217 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 DMRTA1Q5VZB9 504 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 IL27Q8NEV9 243 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 GRAPLQ8TC17 118 aaPredicted RBP11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 JDP2Q8WYK2 163 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 HACL1Q9UJ83 578 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 PNMA3Q9UL41 463 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 PSME4Q14997 1843 aa11.14□□□□□ -0.63
AC005562.1-202ENST00000398849 IL16Q14005 1332 aa11.13□□□□□ -0.63
AC005562.1-202ENST00000398849 TATDN2Q93075 761 aa11.13□□□□□ -0.63
AC005562.1-202ENST00000398849 FAM117AQ9C073 453 aa11.13□□□□□ -0.63
AC005562.1-202ENST00000398849 TRMT112Q9UI30 125 aaKnown RBP11.13□□□□□ -0.63
AC005562.1-202ENST00000398849 EPHX2P34913 555 aa11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 SCNN1DP51172 638 aa11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 EIF6P56537 245 aaKnown RBP11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 KIAA2012Q0VF49 1180 aa11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 KIAA1468Q9P260 1216 aa11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 DAXXQ9UER7 740 aaPredicted RBP11.12□□□□□ -0.63
AC005562.1-202ENST00000398849 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 RCCD1A6NED2 376 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 HRO43593 1189 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 MS4A1P11836 297 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 HTRA3P83110 453 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 CCDC191Q8NCU4 936 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 LAS1LQ9Y4W2 734 aaKnown RBP11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 ZNF609O15014 1411 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 COL4A1P02462 1669 aa11.11□□□□□ -0.63
AC005562.1-202ENST00000398849 SMAPO00193 183 aa11.1□□□□□ -0.63
AC005562.1-202ENST00000398849 HCLS1P14317 486 aaPredicted RBP11.1□□□□□ -0.63
AC005562.1-202ENST00000398849 CCDC30Q5VVM6 783 aa11.1□□□□□ -0.63
AC005562.1-202ENST00000398849 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms