RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ISY1Q9ULR0 285 aaKnown RBP30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 HMGB1P09429 215 aaKnown RBP30.68■■■□□ 2.5
SHARPIN-202ENST00000398712 UQCRFS1P1P0C7P4 283 aa30.68■■■□□ 2.5
SHARPIN-202ENST00000398712 HSPD1P10809 573 aaKnown RBP30.68■■■□□ 2.5
SHARPIN-202ENST00000398712 TTF1Q15361 905 aaPredicted RBP30.68■■■□□ 2.5
SHARPIN-202ENST00000398712 SLFNL1Q499Z3 407 aa30.68■■■□□ 2.5
SHARPIN-202ENST00000398712 SCN7AQ01118 1682 aa30.67■■■□□ 2.5
SHARPIN-202ENST00000398712 MCAMP43121 646 aa30.67■■■□□ 2.5
SHARPIN-202ENST00000398712 RC3H1Q5TC82 1133 aaKnown RBP30.67■■■□□ 2.5
SHARPIN-202ENST00000398712 ZSCAN25Q6NSZ9 544 aa30.67■■■□□ 2.5
SHARPIN-202ENST00000398712 FSD2A1L4K1 749 aa30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 M0R2C6 588 aa30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 FGFR2P21802 821 aa30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 SLC5A1P13866 664 aa30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 ARID4AP29374 1257 aaPredicted RBP30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 IGHMBP2P38935 993 aaKnown RBP30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 TOB2Q14106 344 aaPredicted RBP30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 APPBP2Q92624 585 aa30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 OSBP2Q969R2 916 aa30.66■■■□□ 2.5
SHARPIN-202ENST00000398712 WASHC4Q2M389 1173 aa30.65■■■□□ 2.5
SHARPIN-202ENST00000398712 MEX3CQ5U5Q3 659 aaKnown RBP30.65■■■□□ 2.5
SHARPIN-202ENST00000398712 PRPF40AO75400 957 aaKnown RBP30.64■■■□□ 2.5
SHARPIN-202ENST00000398712 GJB2P29033 226 aa30.64■■■□□ 2.5
SHARPIN-202ENST00000398712 STX6O43752 255 aa30.64■■■□□ 2.49
SHARPIN-202ENST00000398712 PDIA4P13667 645 aaKnown RBP30.64■■■□□ 2.49
SHARPIN-202ENST00000398712 CCDC102BQ68D86 513 aa30.64■■■□□ 2.49
SHARPIN-202ENST00000398712 SEC31BQ9NQW1 1179 aa30.64■■■□□ 2.49
SHARPIN-202ENST00000398712 LAMA4Q16363 1823 aa30.63■■■□□ 2.49
SHARPIN-202ENST00000398712 ZSCAN22P10073 491 aaPredicted RBP30.63■■■□□ 2.49
SHARPIN-202ENST00000398712 SYT1P21579 422 aa30.63■■■□□ 2.49
SHARPIN-202ENST00000398712 COL9A3Q14050 684 aaPredicted RBP30.63■■■□□ 2.49
SHARPIN-202ENST00000398712 TCEANC2Q96MN5 208 aa30.63■■■□□ 2.49
SHARPIN-202ENST00000398712 CTNNA3Q9UI47 895 aa30.63■■■□□ 2.49
SHARPIN-202ENST00000398712 ST3GAL1Q11201 340 aa30.62■■■□□ 2.49
SHARPIN-202ENST00000398712 PI16Q6UXB8 463 aa30.62■■■□□ 2.49
SHARPIN-202ENST00000398712 NECAB1Q8N987 351 aa30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 HELBQ8NG08 1087 aaPredicted RBP30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 RPS6KA4O75676 772 aa30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 PHKA1P46020 1223 aa30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 PTF1AQ7RTS3 328 aa30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 GJD4Q96KN9 370 aaPredicted RBP30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 CDC5LQ99459 802 aaKnown RBP30.61■■■□□ 2.49
SHARPIN-202ENST00000398712 KCNQ4P56696 695 aa30.59■■■□□ 2.49
SHARPIN-202ENST00000398712 ATP6V1DQ9Y5K8 247 aa30.59■■■□□ 2.49
SHARPIN-202ENST00000398712 ATRNO75882 1429 aa30.59■■■□□ 2.49
SHARPIN-202ENST00000398712 Q6ZUG5 572 aa30.59■■■□□ 2.49
SHARPIN-202ENST00000398712 STOX1Q6ZVD7 989 aa30.59■■■□□ 2.49
SHARPIN-202ENST00000398712 DHX32Q7L7V1 743 aaKnown RBP30.59■■■□□ 2.49
SHARPIN-202ENST00000398712 ADD2P35612 726 aa30.58■■■□□ 2.49
SHARPIN-202ENST00000398712 NARFQ9UHQ1 456 aa30.58■■■□□ 2.49
SHARPIN-202ENST00000398712 LY75O60449 1722 aa30.58■■■□□ 2.49
SHARPIN-202ENST00000398712 ERFEQ4G0M1 354 aa30.57■■■□□ 2.48
SHARPIN-202ENST00000398712 CCNL1Q9UK58 526 aaPredicted RBP30.57■■■□□ 2.48
SHARPIN-202ENST00000398712 E7EWF7 191 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 MBD3O95983 291 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 NCLP19338 710 aaKnown RBP30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 UBE3CQ15386 1083 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 CASZ1Q86V15 1759 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 F13A1P00488 732 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 PDCP20941 246 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 SF3B3Q15393 1217 aaKnown RBP30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 CHAMP1Q96JM3 812 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 PUS7LQ9H0K6 701 aaKnown RBP30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 PIH1D3Q9NQM4 214 aaKnown RBP30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 SBF2Q86WG5 1849 aa30.56■■■□□ 2.48
SHARPIN-202ENST00000398712 AFF2P51816 1311 aa30.55■■■□□ 2.48
SHARPIN-202ENST00000398712 MRE11P49959 708 aa30.55■■■□□ 2.48
SHARPIN-202ENST00000398712 FGD1P98174 961 aa30.55■■■□□ 2.48
SHARPIN-202ENST00000398712 IMMTQ16891 758 aaKnown RBP30.55■■■□□ 2.48
SHARPIN-202ENST00000398712 SLC9C2Q5TAH2 1124 aa30.55■■■□□ 2.48
SHARPIN-202ENST00000398712 NYXQ9GZU5 481 aa30.55■■■□□ 2.48
SHARPIN-202ENST00000398712 GPAA1O43292 621 aa30.54■■■□□ 2.48
SHARPIN-202ENST00000398712 TAF1LQ8IZX4 1826 aa30.54■■■□□ 2.48
SHARPIN-202ENST00000398712 GNPATO15228 680 aa30.54■■■□□ 2.48
SHARPIN-202ENST00000398712 SPATA5Q8NB90 893 aa30.54■■■□□ 2.48
SHARPIN-202ENST00000398712 COL24A1Q17RW2 1714 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 ZPR1O75312 459 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 IDH1O75874 414 aaKnown RBP30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 CHRNDQ07001 517 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 SLC10A5Q5PT55 438 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 TBC1D9BQ66K14 1250 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 GPT2Q8TD30 523 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 GTF3C6Q969F1 213 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 BCL2L12Q9HB09 334 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 RTCBQ9Y3I0 505 aaKnown RBP30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 MYO5AQ9Y4I1 1855 aaKnown RBP30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 DOCK2Q92608 1830 aa30.53■■■□□ 2.48
SHARPIN-202ENST00000398712 GTF2E1P29083 439 aaPredicted RBP30.52■■■□□ 2.48
SHARPIN-202ENST00000398712 EXOSC10Q01780 885 aaKnown RBP30.52■■■□□ 2.48
SHARPIN-202ENST00000398712 CAVIN1Q6NZI2 390 aaKnown RBP30.52■■■□□ 2.48
SHARPIN-202ENST00000398712 ANKRD18AQ8IVF6 992 aa30.52■■■□□ 2.48
SHARPIN-202ENST00000398712 MTMR6Q9Y217 621 aa30.52■■■□□ 2.48
SHARPIN-202ENST00000398712 FOXP2O15409 715 aa30.51■■■□□ 2.48
SHARPIN-202ENST00000398712 ONECUT3O60422 494 aaPredicted RBP30.51■■■□□ 2.48
SHARPIN-202ENST00000398712 BICDL1Q6ZP65 573 aa30.51■■■□□ 2.48
SHARPIN-202ENST00000398712 BRF1Q92994 677 aa30.51■■■□□ 2.48
SHARPIN-202ENST00000398712 TRPC5Q9UL62 973 aaPredicted RBP30.51■■■□□ 2.48
SHARPIN-202ENST00000398712 STK3Q13188 491 aa30.51■■■□□ 2.47
SHARPIN-202ENST00000398712 FAM182BQ5T319 152 aa30.51■■■□□ 2.47
SHARPIN-202ENST00000398712 LARP1BQ659C4 914 aaKnown RBP30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms