RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 GTF2IP78347 998 aa17.89■□□□□ 0.45
LSS-202ENST00000397728 PLS1Q14651 629 aa17.89■□□□□ 0.45
LSS-202ENST00000397728 TRIM5Q9C035 493 aa17.89■□□□□ 0.45
LSS-202ENST00000397728 SMC2O95347 1197 aa17.89■□□□□ 0.45
LSS-202ENST00000397728 PCCAP05165 728 aaPredicted RBP17.89■□□□□ 0.45
LSS-202ENST00000397728 PRKG1Q13976 671 aa17.89■□□□□ 0.45
LSS-202ENST00000397728 USP44Q9H0E7 712 aa17.89■□□□□ 0.45
LSS-202ENST00000397728 LETM1O95202 739 aaPredicted RBP17.88■□□□□ 0.45
LSS-202ENST00000397728 ZFYVE27Q5T4F4 411 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 SPHKAPQ2M3C7 1700 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 TMEM266Q2M3C6 531 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 TANGO6Q9C0B7 1094 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 NDUFB9Q9Y6M9 179 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 MAST3O60307 1309 aa17.88■□□□□ 0.45
LSS-202ENST00000397728 AGLP35573 1532 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 ODF2Q5BJF6 829 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 ZNF592Q92610 1267 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 SRP68Q9UHB9 627 aaKnown RBP17.87■□□□□ 0.45
LSS-202ENST00000397728 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
LSS-202ENST00000397728 PRC1O43663 620 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 RAB3GAP1Q15042 981 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 RTN1Q16799 776 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 EAPPQ56P03 285 aaPredicted RBP17.87■□□□□ 0.45
LSS-202ENST00000397728 OTUD7AQ8TE49 926 aaPredicted RBP17.87■□□□□ 0.45
LSS-202ENST00000397728 CDC42BPGQ6DT37 1551 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 SETD1BQ9UPS6 1966 aaKnown RBP17.87■□□□□ 0.45
LSS-202ENST00000397728 ARHGEF40Q8TER5 1519 aa17.87■□□□□ 0.45
LSS-202ENST00000397728 NECAB1Q8N987 351 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 ABCA6Q8N139 1617 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 AATFQ9NY61 560 aaKnown RBP eCLIP17.86■□□□□ 0.454e-6■□□□□ 10.1
LSS-202ENST00000397728 SAMM50Q9Y512 469 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
LSS-202ENST00000397728 DLGAP5Q15398 846 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 GLI2P10070 1586 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 KDRP35968 1356 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 H7C1D1 291 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 GNAQP50148 359 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 PDCL3Q9H2J4 239 aa17.86■□□□□ 0.45
LSS-202ENST00000397728 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 TCP10Q12799 353 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 MFSD14BQ5SR56 506 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 DPY19L2Q6NUT2 758 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 BEND3Q5T5X7 828 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 GJB2P29033 226 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 HEATR3Q7Z4Q2 680 aa17.85■□□□□ 0.45
LSS-202ENST00000397728 BAG4O95429 457 aaKnown RBP17.84■□□□□ 0.45
LSS-202ENST00000397728 TRAF1Q13077 416 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 SPATA5Q8NB90 893 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 DACH1Q9UI36 760 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 ZMYM4Q5VZL5 1548 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 HEG1Q9ULI3 1381 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 CCDC192P0DO97 292 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 GYG1P46976 350 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 PPP4R3AQ6IN85 833 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 Q6ZUG5 572 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 GREM2Q9H772 168 aa17.84■□□□□ 0.45
LSS-202ENST00000397728 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
LSS-202ENST00000397728 MMP10P09238 476 aa17.83■□□□□ 0.45
LSS-202ENST00000397728 ZAP70P43403 619 aa17.83■□□□□ 0.45
LSS-202ENST00000397728 CCDC129Q6ZRS4 1044 aa17.83■□□□□ 0.45
LSS-202ENST00000397728 MPHOSPH6Q99547 160 aaKnown RBP17.83■□□□□ 0.45
LSS-202ENST00000397728 SERPINC1P01008 464 aa17.83■□□□□ 0.45
LSS-202ENST00000397728 SYCP1Q15431 976 aa17.83■□□□□ 0.45
LSS-202ENST00000397728 PICK1Q9NRD5 415 aa17.83■□□□□ 0.45
LSS-202ENST00000397728 TTF2Q9UNY4 1162 aaKnown RBP17.83■□□□□ 0.45
LSS-202ENST00000397728 TSPY26PQ9H489 355 aa17.83■□□□□ 0.44
LSS-202ENST00000397728 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.44
LSS-202ENST00000397728 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
LSS-202ENST00000397728 UBA5Q9GZZ9 404 aa17.83■□□□□ 0.44
LSS-202ENST00000397728 NUP62CLQ9H1M0 184 aa17.83■□□□□ 0.44
LSS-202ENST00000397728 SPATA31A6Q5VVP1 1343 aa17.83■□□□□ 0.44
LSS-202ENST00000397728 KCNQ2O43526 872 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
LSS-202ENST00000397728 TFIP11Q9UBB9 837 aaKnown RBP17.82■□□□□ 0.44
LSS-202ENST00000397728 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 PRDM1O75626 825 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 CHMLP26374 656 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 INO80Q9ULG1 1556 aaPredicted RBP17.82■□□□□ 0.44
LSS-202ENST00000397728 ATP2B4P23634 1241 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 KIAA0825Q8IV33 1275 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 APPBP2Q92624 585 aa17.82■□□□□ 0.44
LSS-202ENST00000397728 KDM4FA0A1W2PPD8 638 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 PPRC1Q5VV67 1664 aaKnown RBP17.81■□□□□ 0.44
LSS-202ENST00000397728 E9PCH4 1651 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 GPAA1O43292 621 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 NAPAP54920 295 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 ERFEQ4G0M1 354 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 TBC1D2Q9BYX2 928 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 HELLSQ9NRZ9 838 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 TCP11L1Q9NUJ3 509 aa17.81■□□□□ 0.44
LSS-202ENST00000397728 NASPP49321 788 aaPredicted RBP17.8■□□□□ 0.44
LSS-202ENST00000397728 CHRNDQ07001 517 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms