RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 SH3RF1Q7Z6J0 888 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 DNAJC10Q8IXB1 793 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 TTC5Q8N0Z6 440 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
PTPN20-208ENST00000395727 PKD2L1Q9P0L9 805 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 COG6Q9Y2V7 657 aa8.16□□□□□ -1.1
PTPN20-208ENST00000395727 ARFGEF1Q9Y6D6 1849 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 LAMB4A4D0S4 1761 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 BCORQ6W2J9 1755 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 KDM3BQ7LBC6 1761 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 DLEC1Q9Y238 1755 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 SLC39A6Q13433 755 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 FOXJ1Q92949 421 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 GDPD2Q9HCC8 539 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 NARFQ9UHQ1 456 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 GPSM3Q9Y4H4 160 aa8.15□□□□□ -1.1
PTPN20-208ENST00000395727 GDF9O60383 454 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 STARD3NLO95772 234 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 U2AF1L5P0DN76 240 aaPredicted RBP8.14□□□□□ -1.11
PTPN20-208ENST00000395727 TM4SF1P30408 202 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 EIF5P55010 431 aaKnown RBP8.14□□□□□ -1.11
PTPN20-208ENST00000395727 U2AF1Q01081 240 aaKnown RBP eCLIP8.14□□□□□ -1.11
PTPN20-208ENST00000395727 IRF5Q13568 498 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 RALBP1Q15311 655 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 BPHLQ86WA6 291 aaPredicted RBP8.14□□□□□ -1.11
PTPN20-208ENST00000395727 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 ZNF496Q96IT1 587 aaPredicted RBP8.14□□□□□ -1.11
PTPN20-208ENST00000395727 FMNL2Q96PY5 1086 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 PRM3Q9NNZ6 103 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 ZBTB1Q9Y2K1 713 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
PTPN20-208ENST00000395727 N4BP2Q86UW6 1770 aaPredicted RBP8.14□□□□□ -1.11
PTPN20-208ENST00000395727 DLG5Q8TDM6 1919 aa8.13□□□□□ -1.11
PTPN20-208ENST00000395727 AFDNP55196 1824 aaKnown RBP8.13□□□□□ -1.11
PTPN20-208ENST00000395727 POLRMTO00411 1230 aaKnown RBP8.13□□□□□ -1.11
PTPN20-208ENST00000395727 IL6STP40189 918 aaPredicted RBP8.13□□□□□ -1.11
PTPN20-208ENST00000395727 DDR1Q08345 913 aa8.13□□□□□ -1.11
PTPN20-208ENST00000395727 PLEKHF1Q96S99 279 aa8.13□□□□□ -1.11
PTPN20-208ENST00000395727 C1QTNF2Q9BXJ5 285 aa8.13□□□□□ -1.11
PTPN20-208ENST00000395727 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
PTPN20-208ENST00000395727 A0A087WZG4 1122 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 BTBD11A6QL63 1104 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 VARSP26640 1264 aaKnown RBP8.12□□□□□ -1.11
PTPN20-208ENST00000395727 PRR20EP86478 221 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 PRR20CP86479 221 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 PRR20DP86480 221 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 PRR20BP86481 221 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 PRR20AP86496 221 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 PTK2Q05397 1052 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
PTPN20-208ENST00000395727 MRGPRX2Q96LB1 330 aa8.12□□□□□ -1.11
PTPN20-208ENST00000395727 SRP68Q9UHB9 627 aaKnown RBP8.12□□□□□ -1.11
PTPN20-208ENST00000395727 MYBBP1AQ9BQG0 1328 aaKnown RBP8.11□□□□□ -1.11
PTPN20-208ENST00000395727 SIAH2O43255 324 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 NEFMP07197 916 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 KCNA3P22001 575 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 FOXC1Q12948 553 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 CNGB1Q14028 1251 aaPredicted RBP8.11□□□□□ -1.11
PTPN20-208ENST00000395727 USPL1Q5W0Q7 1092 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 ATP10DQ9P241 1426 aa8.11□□□□□ -1.11
PTPN20-208ENST00000395727 CARMIL3Q8ND23 1372 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 ZBBXA8MT70 800 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 SNRPA1P09661 255 aaKnown RBP8.1□□□□□ -1.11
PTPN20-208ENST00000395727 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 NFIXQ14938 502 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 AGERQ15109 404 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
PTPN20-208ENST00000395727 NFE2L2Q16236 605 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 PNISRQ8TF01 805 aaKnown RBP8.1□□□□□ -1.11
PTPN20-208ENST00000395727 PDZRN3Q9UPQ7 1066 aa8.1□□□□□ -1.11
PTPN20-208ENST00000395727 TNFRSF10AO00220 468 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 RAD21O60216 631 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 DPEP1P16444 411 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 CANXP27824 592 aaKnown RBP8.09□□□□□ -1.11
PTPN20-208ENST00000395727 ABL2P42684 1182 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 NR1H3Q13133 447 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 ERFEQ4G0M1 354 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 CLEC4GQ6UXB4 293 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 MCM10Q7L590 875 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
PTPN20-208ENST00000395727 MPNDQ8N594 471 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 BABAM1Q9NWV8 329 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 PIM2Q9P1W9 311 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 ARFGEF2Q9Y6D5 1785 aa8.09□□□□□ -1.11
PTPN20-208ENST00000395727 UTRNP46939 3433 aa8.09□□□□□ -1.12
PTPN20-208ENST00000395727 ANKRD31Q8N7Z5 1873 aa8.09□□□□□ -1.12
PTPN20-208ENST00000395727 ERBB4Q15303 1308 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 MAGEB6P1A0A0J9YX57 407 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 A6NJR5 290 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 KCNQ3O43525 872 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 CAMTA2O94983 1202 aa8.08□□□□□ -1.12
PTPN20-208ENST00000395727 FAM174AQ8TBP5 190 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms