RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 PHAXQ9H814 394 aaKnown RBP25.44■■□□□ 1.66
UPK3B-203ENST00000394849 ZNF853P0CG23 659 aa25.43■■□□□ 1.66
UPK3B-203ENST00000394849 NBPF9Q3BBW0 867 aa25.43■■□□□ 1.66
UPK3B-203ENST00000394849 STRIP1Q5VSL9 837 aa25.43■■□□□ 1.66
UPK3B-203ENST00000394849 BSDC1Q9NW68 430 aaPredicted RBP25.43■■□□□ 1.66
UPK3B-203ENST00000394849 WNT10BO00744 389 aa25.42■■□□□ 1.66
UPK3B-203ENST00000394849 DACT2Q5SW24 774 aa25.42■■□□□ 1.66
UPK3B-203ENST00000394849 ARMC9Q7Z3E5 817 aa25.42■■□□□ 1.66
UPK3B-203ENST00000394849 GCC1Q96CN9 775 aa25.42■■□□□ 1.66
UPK3B-203ENST00000394849 CCDC85AQ96PX6 553 aaPredicted RBP25.42■■□□□ 1.66
UPK3B-203ENST00000394849 COA1Q9GZY4 146 aa25.42■■□□□ 1.66
UPK3B-203ENST00000394849 IFT57Q9NWB7 429 aa25.42■■□□□ 1.66
UPK3B-203ENST00000394849 FKTNO75072 461 aa25.41■■□□□ 1.66
UPK3B-203ENST00000394849 ALDH1A1P00352 501 aa25.41■■□□□ 1.66
UPK3B-203ENST00000394849 CTSWP56202 376 aa25.41■■□□□ 1.66
UPK3B-203ENST00000394849 GNAI1P63096 354 aa25.41■■□□□ 1.66
UPK3B-203ENST00000394849 APOBEC3FQ8IUX4 373 aaKnown RBP25.4■■□□□ 1.66
UPK3B-203ENST00000394849 MINPP1Q9UNW1 487 aa25.4■■□□□ 1.66
UPK3B-203ENST00000394849 ADAMTS8Q9UP79 889 aa25.4■■□□□ 1.66
UPK3B-203ENST00000394849 MYH3P11055 1940 aa25.39■■□□□ 1.66
UPK3B-203ENST00000394849 INHBEP58166 350 aa25.39■■□□□ 1.66
UPK3B-203ENST00000394849 PRAMEF18Q5VWM3 479 aa25.39■■□□□ 1.66
UPK3B-203ENST00000394849 LEMD3Q9Y2U8 911 aa25.39■■□□□ 1.66
UPK3B-203ENST00000394849 CCT4P50991 539 aaKnown RBP25.38■■□□□ 1.65
UPK3B-203ENST00000394849 CCDC30Q5VVM6 783 aa25.38■■□□□ 1.65
UPK3B-203ENST00000394849 TTLL11Q8NHH1 800 aa25.38■■□□□ 1.65
UPK3B-203ENST00000394849 SCAF8Q9UPN6 1271 aaKnown RBP25.38■■□□□ 1.65
UPK3B-203ENST00000394849 PTPN12Q05209 780 aaKnown RBP25.36■■□□□ 1.65
UPK3B-203ENST00000394849 NEXNQ0ZGT2 675 aa25.36■■□□□ 1.65
UPK3B-203ENST00000394849 LDLRAD1Q5T700 205 aa25.36■■□□□ 1.65
UPK3B-203ENST00000394849 JARID2Q92833 1246 aaPredicted RBP25.36■■□□□ 1.65
UPK3B-203ENST00000394849 COL1A1P02452 1464 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-203ENST00000394849 ELL2O00472 640 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-203ENST00000394849 TTLL5Q6EMB2 1281 aa25.35■■□□□ 1.65
UPK3B-203ENST00000394849 FBXW7Q969H0 707 aa25.35■■□□□ 1.65
UPK3B-203ENST00000394849 MAP3K2Q9Y2U5 619 aa25.35■■□□□ 1.65
UPK3B-203ENST00000394849 ZNF646O15015 1829 aaPredicted RBP25.35■■□□□ 1.65
UPK3B-203ENST00000394849 MANSC4A6NHS7 340 aaPredicted RBP25.34■■□□□ 1.65
UPK3B-203ENST00000394849 MKRN3Q13064 507 aaKnown RBP25.34■■□□□ 1.65
UPK3B-203ENST00000394849 SPRYD7Q5W111 196 aa25.34■■□□□ 1.65
UPK3B-203ENST00000394849 INTS3Q68E01 1043 aaKnown RBP25.34■■□□□ 1.65
UPK3B-203ENST00000394849 KSR2Q6VAB6 950 aa25.34■■□□□ 1.65
UPK3B-203ENST00000394849 ANKRD2Q9GZV1 360 aa25.34■■□□□ 1.65
UPK3B-203ENST00000394849 GREM2Q9H772 168 aa25.34■■□□□ 1.65
UPK3B-203ENST00000394849 UNCXA6NJT0 531 aa25.33■■□□□ 1.65
UPK3B-203ENST00000394849 IGHMBP2P38935 993 aaKnown RBP25.33■■□□□ 1.65
UPK3B-203ENST00000394849 MXD3Q9BW11 206 aa25.33■■□□□ 1.65
UPK3B-203ENST00000394849 SPEF2Q9C093 1822 aa25.33■■□□□ 1.64
UPK3B-203ENST00000394849 SASH1O94885 1247 aa25.32■■□□□ 1.64
UPK3B-203ENST00000394849 WTIPA6NIX2 430 aaPredicted RBP25.31■■□□□ 1.64
UPK3B-203ENST00000394849 ZBTB48P10074 688 aaPredicted RBP25.31■■□□□ 1.64
UPK3B-203ENST00000394849 SLC10A4Q96EP9 437 aa25.31■■□□□ 1.64
UPK3B-203ENST00000394849 ZBED3Q96IU2 234 aaPredicted RBP25.31■■□□□ 1.64
UPK3B-203ENST00000394849 ANGEL1Q9UNK9 670 aaKnown RBP25.31■■□□□ 1.64
UPK3B-203ENST00000394849 ZNF804BA4D1E1 1349 aa25.31■■□□□ 1.64
UPK3B-203ENST00000394849 PI4KAP2A4QPH2 592 aa25.3■■□□□ 1.64
UPK3B-203ENST00000394849 IGKV5-2P06315 115 aa25.3■■□□□ 1.64
UPK3B-203ENST00000394849 PI4KAP1Q8N8J0 262 aa25.3■■□□□ 1.64
UPK3B-203ENST00000394849 C8orf58Q8NAV2 365 aa25.3■■□□□ 1.64
UPK3B-203ENST00000394849 PPP2R3BQ9Y5P8 575 aa25.3■■□□□ 1.64
UPK3B-203ENST00000394849 PPP1R12BO60237 982 aaPredicted RBP25.29■■□□□ 1.64
UPK3B-203ENST00000394849 MAP3K11Q16584 847 aa25.29■■□□□ 1.64
UPK3B-203ENST00000394849 KIAA0825Q8IV33 1275 aa25.29■■□□□ 1.64
UPK3B-203ENST00000394849 PRKG1Q13976 671 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 TXNRD3Q86VQ6 643 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 IFNL1Q8IU54 200 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 MPHOSPH8Q99549 860 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 STK31Q9BXU1 1019 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 DEFB129Q9H1M3 183 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 R3HDMLQ9H3Y0 253 aa25.28■■□□□ 1.64
UPK3B-203ENST00000394849 APAF1O14727 1248 aa25.27■■□□□ 1.64
UPK3B-203ENST00000394849 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
UPK3B-203ENST00000394849 DLGAP5Q15398 846 aa25.27■■□□□ 1.64
UPK3B-203ENST00000394849 MTMR14Q8NCE2 650 aa25.27■■□□□ 1.64
UPK3B-203ENST00000394849 TRIM17Q9Y577 477 aa25.27■■□□□ 1.64
UPK3B-203ENST00000394849 LAMB1P07942 1786 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 NEURL1BA8MQ27 555 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 H7C1W4 665 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 KCNJ4P48050 445 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 GTF2IP78347 998 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 SUPT20HL1Q3ZLR7 823 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 OTUD7BQ6GQQ9 843 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 PLA2G12BQ9BX93 195 aa25.26■■□□□ 1.63
UPK3B-203ENST00000394849 MYO1BO43795 1136 aa25.25■■□□□ 1.63
UPK3B-203ENST00000394849 OTOP1Q7RTM1 612 aa25.25■■□□□ 1.63
UPK3B-203ENST00000394849 UBE3BQ7Z3V4 1068 aa25.25■■□□□ 1.63
UPK3B-203ENST00000394849 ERO1AQ96HE7 468 aa25.25■■□□□ 1.63
UPK3B-203ENST00000394849 HTTP42858 3142 aa25.25■■□□□ 1.63
UPK3B-203ENST00000394849 ITGA6P23229 1130 aa25.24■■□□□ 1.63
UPK3B-203ENST00000394849 ECM29Q5VYK3 1845 aa25.23■■□□□ 1.63
UPK3B-203ENST00000394849 CWF19L2Q2TBE0 894 aaKnown RBP25.23■■□□□ 1.63
UPK3B-203ENST00000394849 WNK4Q96J92 1243 aa25.23■■□□□ 1.63
UPK3B-203ENST00000394849 CD209Q9NNX6 404 aa25.23■■□□□ 1.63
UPK3B-203ENST00000394849 C15orf52Q6ZUT6 534 aaKnown RBP25.22■■□□□ 1.63
UPK3B-203ENST00000394849 RBBP6Q7Z6E9 1792 aaKnown RBP25.22■■□□□ 1.63
UPK3B-203ENST00000394849 FKBP1AP62942 108 aaKnown RBP25.21■■□□□ 1.63
UPK3B-203ENST00000394849 MYH16Q9H6N6 1097 aa25.21■■□□□ 1.63
UPK3B-203ENST00000394849 MKI67P46013 3256 aaKnown RBP25.21■■□□□ 1.63
UPK3B-203ENST00000394849 CSF1RP07333 972 aa25.2■■□□□ 1.62
UPK3B-203ENST00000394849 KLRK1P26718 216 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms