RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 DIXDC1Q155Q3 683 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 NRBF2Q96F24 287 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 GGT6Q6P531 493 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 MMS22LQ6ZRQ5 1243 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 KRT4P19013 534 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 EFHD2Q96C19 240 aaPredicted RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 BAG1Q99933 345 aaPredicted RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 PABPN1LA6NDY0 278 aaKnown RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 GLRX3O76003 335 aaKnown RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 DHX9Q08211 1270 aaKnown RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 PIBF1Q8WXW3 757 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 HDAC9Q9UKV0 1011 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 NOP2P46087 812 aaKnown RBP10.2□□□□□ -0.78
CHD2-201ENST00000394196 CNGB3Q9NQW8 809 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 RUFY4Q6ZNE9 571 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 NME8Q8N427 588 aa10.2□□□□□ -0.78
CHD2-201ENST00000394196 TAOK1Q7L7X3 1001 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 TMCO5AQ8N6Q1 288 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 TBCAO75347 108 aaKnown RBP10.19□□□□□ -0.78
CHD2-201ENST00000394196 PODNQ7Z5L7 613 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 TBC1D5Q92609 795 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 SH3GL2Q99962 352 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 CCDC14Q49A88 953 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 ACRBPQ8NEB7 543 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 DNAJC17Q9NVM6 304 aaKnown RBP10.19□□□□□ -0.78
CHD2-201ENST00000394196 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 A0A087WZG4 1122 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 MTIF2P46199 727 aaKnown RBP10.19□□□□□ -0.78
CHD2-201ENST00000394196 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 PHEXP78562 749 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 STK3Q13188 491 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 ACBD5Q5T8D3 534 aaPredicted RBP10.19□□□□□ -0.78
CHD2-201ENST00000394196 DNAI1Q9UI46 699 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 NBPF20Q3BBV1 942 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 TRAK1Q9UPV9 953 aa10.19□□□□□ -0.78
CHD2-201ENST00000394196 SOGA1O94964 1423 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 MAP7D3Q8IWC1 876 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 NOB1Q9ULX3 412 aaKnown RBP10.18□□□□□ -0.78
CHD2-201ENST00000394196 DTNBO60941 627 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 CXorf38Q8TB03 319 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 N4BP2L2Q92802 583 aaPredicted RBP10.18□□□□□ -0.78
CHD2-201ENST00000394196 RWDD3Q9Y3V2 267 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 RAD50Q92878 1312 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 INPP1P49441 399 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 TNNC1P63316 161 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 TWISTNBQ3B726 338 aaPredicted RBP10.18□□□□□ -0.78
CHD2-201ENST00000394196 EIF3DO15371 548 aaKnown RBP eCLIP10.18□□□□□ -0.784e-7■■■□□ 15.5
CHD2-201ENST00000394196 FLOT1O75955 427 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 SPAG5Q96R06 1193 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 TTC1Q99614 292 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 NKTRP30414 1462 aaKnown RBP10.18□□□□□ -0.78
CHD2-201ENST00000394196 STX6O43752 255 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 NKIRAS1Q9NYS0 192 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 ZEB2O60315 1214 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 SECISBP2LQ93073 1101 aaKnown RBP10.18□□□□□ -0.78
CHD2-201ENST00000394196 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
CHD2-201ENST00000394196 DYTNA2CJ06 578 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 CCDC96Q2M329 555 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 CWC27Q6UX04 472 aaKnown RBP10.17□□□□□ -0.78
CHD2-201ENST00000394196 CCDC26Q8TAB7 109 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 KCNG4Q8TDN1 519 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 ABTB1Q969K4 478 aaPredicted RBP10.17□□□□□ -0.78
CHD2-201ENST00000394196 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
CHD2-201ENST00000394196 MED4Q9NPJ6 270 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 RWDD2BP57060 319 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 PPP4R3AQ6IN85 833 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 FSIP1Q8NA03 581 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 C10orf88Q9H8K7 445 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 OLFM3Q96PB7 478 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 TSC22D4Q9Y3Q8 395 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 CD2APQ9Y5K6 639 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 ELP1O95163 1332 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 PALM3A6NDB9 673 aaPredicted RBP10.17□□□□□ -0.78
CHD2-201ENST00000394196 KIF1BPQ96EK5 621 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 PUS7Q96PZ0 661 aaKnown RBP10.17□□□□□ -0.78
CHD2-201ENST00000394196 MMRN2Q9H8L6 949 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 CAPN9O14815 690 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 STRN4Q9NRL3 753 aa10.17□□□□□ -0.78
CHD2-201ENST00000394196 ZMYND8Q9ULU4 1186 aaPredicted RBP10.17□□□□□ -0.78
CHD2-201ENST00000394196 KIF6Q6ZMV9 814 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 GPR161Q8N6U8 529 aaKnown RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 SEC63Q9UGP8 760 aaKnown RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 OPHN1O60890 802 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 RANBP1P43487 201 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 NFE2L2Q16236 605 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 CALML4Q96GE6 196 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 SKIP12755 728 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 XRCC6P12956 609 aaKnown RBP eCLIP10.16□□□□□ -0.782e-9■■■■■ 28.3
CHD2-201ENST00000394196 HMG20BQ9P0W2 317 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 SESN1Q9Y6P5 492 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 A0A087WUV0 522 aaPredicted RBP10.16□□□□□ -0.78
CHD2-201ENST00000394196 ATP2C2O75185 946 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 TCP11L2Q8N4U5 519 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 TCP11L1Q9NUJ3 509 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 FYCO1Q9BQS8 1478 aa10.16□□□□□ -0.78
CHD2-201ENST00000394196 SLC38A10Q9HBR0 1119 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms