RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZRANB1Q9UGI0 708 aa8.71□□□□□ -1.01
VTI1A-201ENST00000393077 RIPOR2Q9Y4F9 1068 aa8.71□□□□□ -1.01
VTI1A-201ENST00000393077 SMIM24O75264 130 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 TBC1D31Q96DN5 1066 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 PPP1R13BQ96KQ4 1090 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 TSPYL4Q9UJ04 414 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 CFAP45Q9UL16 551 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 LIMCH1Q9UPQ0 1083 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 RIMS2Q9UQ26 1411 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 PSDA5PKW4 1024 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-201ENST00000393077 WHAMMP3Q1A5X7 153 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 ZSCAN16Q9H4T2 348 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-201ENST00000393077 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.71□□□□□ -1.02
VTI1A-201ENST00000393077 SAMM50Q9Y512 469 aa8.71□□□□□ -1.02
VTI1A-201ENST00000393077 SDSP20132 328 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 GJB2P29033 226 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 ME1P48163 572 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 ADCY2Q08462 1091 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 ODF2Q5BJF6 829 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 EPC1Q9H2F5 836 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 RNF40O75150 1001 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 FOSBP53539 338 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 GNGT1P63211 74 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 ARID5BQ14865 1188 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 CAPRIN2Q6IMN6 1127 aaKnown RBP8.7□□□□□ -1.02
VTI1A-201ENST00000393077 SPATS2Q86XZ4 545 aaKnown RBP8.7□□□□□ -1.02
VTI1A-201ENST00000393077 KIF2CQ99661 725 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 IFNKQ9P0W0 207 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 BIN2Q9UBW5 565 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-201ENST00000393077 NEO1Q92859 1461 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-201ENST00000393077 ANKRD18BA2A2Z9 1011 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 KLHL33A6NCF5 533 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 FOXO3O43524 673 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 OPA1O60313 960 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 IQUBQ8NA54 791 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 NLRP2Q9NX02 1062 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 NPHP3Q7Z494 1330 aa8.7□□□□□ -1.02
VTI1A-201ENST00000393077 KLHL23Q8NBE8 558 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 ZSCAN31Q96LW9 406 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 CAPS2Q9BXY5 557 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 TTC41PQ6P2S7 1318 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 A6NNZ2 444 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 FCHSD2O94868 740 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 KARSQ15046 597 aaKnown RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 TUBB8Q3ZCM7 444 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 PPFIBP1Q86W92 1011 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 RMI1Q9H9A7 625 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 IMPACTQ9P2X3 320 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 SKAP2O75563 359 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 TBC1D8O95759 1140 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 ACRBPQ8NEB7 543 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 TDRD7Q8NHU6 1098 aaKnown RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 TSC22D3Q99576 134 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 CD248Q9HCU0 757 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 PPP1R12BO60237 982 aaPredicted RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 STIM1Q13586 685 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 SMARCC2Q8TAQ2 1214 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 WDR66Q8TBY9 1149 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 THOC1Q96FV9 657 aaKnown RBP8.69□□□□□ -1.02
VTI1A-201ENST00000393077 ZBTB40Q9NUA8 1239 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 DMRT2Q9Y5R5 561 aa8.69□□□□□ -1.02
VTI1A-201ENST00000393077 ACEP12821 1306 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 GOLGA6L10A0A0M3HER8 536 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 TPD52L2O43399 206 aaKnown RBP8.68□□□□□ -1.02
VTI1A-201ENST00000393077 EPB41L2O43491 1005 aaKnown RBP8.68□□□□□ -1.02
VTI1A-201ENST00000393077 PRPHP41219 470 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 CCDC40Q4G0X9 1142 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 SLC30A9Q6PML9 568 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 RUFY2Q8WXA3 655 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 CYP46A1Q9Y6A2 500 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 ADCY10Q96PN6 1610 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 PHLPP2Q6ZVD8 1323 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 ABCD1P33897 745 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 CCDC144BQ3MJ40 725 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 KLC4Q9NSK0 619 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 ZNHIT6Q9NWK9 470 aaKnown RBP8.68□□□□□ -1.02
VTI1A-201ENST00000393077 CDC25BP30305 580 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 TWISTNBQ3B726 338 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-201ENST00000393077 GNPTABQ3T906 1256 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 HHATQ5VTY9 493 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 IQCEQ6IPM2 695 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 PNMA8AQ86V59 439 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-201ENST00000393077 CLASP1Q7Z460 1538 aa8.68□□□□□ -1.02
VTI1A-201ENST00000393077 AK9Q5TCS8 1911 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 CDKL5O76039 1030 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 MXRA7P84157 204 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 TRMT2AQ8IZ69 625 aaKnown RBP8.67□□□□□ -1.02
VTI1A-201ENST00000393077 KIRREL3Q8IZU9 778 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 MIS18AQ9NYP9 233 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 ASXL1Q8IXJ9 1541 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 CTAGE9A4FU28 777 aa8.67□□□□□ -1.02
VTI1A-201ENST00000393077 TADA3O75528 432 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms