RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 LAMC2Q13753 1193 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 KRT25Q7Z3Z0 450 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 OR13H1Q8NG92 308 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 PNMA5Q96PV4 448 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
SSX3-203ENST00000376895 EHD4Q9H223 541 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 DDX41Q9UJV9 622 aaKnown RBP8.1□□□□□ -1.11
SSX3-203ENST00000376895 TTF2Q9UNY4 1162 aaKnown RBP8.1□□□□□ -1.11
SSX3-203ENST00000376895 PCDHGC4Q9Y5F7 938 aa8.1□□□□□ -1.11
SSX3-203ENST00000376895 PCF11O94913 1555 aaKnown RBP8.1□□□□□ -1.11
SSX3-203ENST00000376895 TNNI2P48788 182 aa8.09□□□□□ -1.11
SSX3-203ENST00000376895 SFSWAPQ12872 951 aaKnown RBP8.09□□□□□ -1.11
SSX3-203ENST00000376895 KIAA0319Q5VV43 1072 aa8.09□□□□□ -1.11
SSX3-203ENST00000376895 INPP5FQ9Y2H2 1132 aa8.09□□□□□ -1.11
SSX3-203ENST00000376895 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 POTECB2RU33 542 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 H7C1W4 665 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 MMP20O60882 483 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 CYP2E1P05181 493 aaPredicted RBP8.08□□□□□ -1.12
SSX3-203ENST00000376895 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
SSX3-203ENST00000376895 GSX2Q9BZM3 304 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 PRKAG2Q9UGJ0 569 aa8.08□□□□□ -1.12
SSX3-203ENST00000376895 CDK13Q14004 1512 aaKnown RBP8.08□□□□□ -1.12
SSX3-203ENST00000376895 LRRC9Q6ZRR7 1453 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 A0A1W2PP55 124 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 NRG2O14511 850 aaPredicted RBP8.07□□□□□ -1.12
SSX3-203ENST00000376895 PSAPP07602 524 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 TARSP26639 723 aaKnown RBP8.07□□□□□ -1.12
SSX3-203ENST00000376895 SOX18P35713 384 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
SSX3-203ENST00000376895 GLIS3Q8NEA6 775 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 LATS2Q9NRM7 1088 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 PPM1HQ9ULR3 514 aa8.07□□□□□ -1.12
SSX3-203ENST00000376895 TIAM1Q13009 1591 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 THBS1P07996 1170 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 MAPTP10636 758 aaKnown RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 NFKB1P19838 968 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 ATP2B1P20020 1258 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 DNAJA1P31689 397 aaKnown RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 PTSQ03393 145 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 TNP2Q05952 138 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 PEAR1Q5VY43 1037 aaPredicted RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 ERMP1Q7Z2K6 904 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 C3orf58Q8NDZ4 430 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 NOC4LQ9BVI4 516 aaKnown RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 OXCT2Q9BYC2 517 aaPredicted RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 ATP13A2Q9NQ11 1180 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 MARK1Q9P0L2 795 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 SALL4Q9UJQ4 1053 aa8.06□□□□□ -1.12
SSX3-203ENST00000376895 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
SSX3-203ENST00000376895 ADCY10Q96PN6 1610 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 SLC35F4A4IF30 521 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 FCGRTP55899 365 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 PLAURQ03405 335 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 ARID5AQ03989 594 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 SPEM2Q0P670 501 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 UBAP2LQ14157 1087 aaKnown RBP8.05□□□□□ -1.12
SSX3-203ENST00000376895 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 ARMC5Q96C12 935 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 GMLQ99445 158 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 LIN7BQ9HAP6 207 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
SSX3-203ENST00000376895 ABCB6Q9NP58 842 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 ZFATQ9P243 1243 aa8.05□□□□□ -1.12
SSX3-203ENST00000376895 ASXL2Q76L83 1435 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 KIF4AO95239 1232 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 HOXD8P13378 290 aaPredicted RBP8.04□□□□□ -1.12
SSX3-203ENST00000376895 HYAL2Q12891 473 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 PWP1Q13610 501 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 GMCL1Q96IK5 515 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 TLR7Q9NYK1 1049 aaKnown RBP8.04□□□□□ -1.12
SSX3-203ENST00000376895 CCNB3Q8WWL7 1395 aa8.04□□□□□ -1.12
SSX3-203ENST00000376895 SOBPA7XYQ1 873 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 GFRA3O60609 400 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 MAP3K6O95382 1288 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 GJA8P48165 433 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 NEUROD1Q13562 356 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 CCDC85BQ15834 202 aaPredicted RBP8.03□□□□□ -1.12
SSX3-203ENST00000376895 VPS37DQ86XT2 251 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 ANKRD24Q8TF21 1146 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 BHMTQ93088 406 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 ZKSCAN3Q9BRR0 538 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 STRN4Q9NRL3 753 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 NDFIP2Q9NV92 336 aa8.03□□□□□ -1.12
SSX3-203ENST00000376895 CFDP1Q9UEE9 299 aaPredicted RBP8.03□□□□□ -1.12
SSX3-203ENST00000376895 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
SSX3-203ENST00000376895 WDR7Q9Y4E6 1490 aa8.02□□□□□ -1.13
SSX3-203ENST00000376895 TMEM238LA0A1B0GVL6 79 aa8.02□□□□□ -1.13
SSX3-203ENST00000376895 BNIP3LO60238 219 aa8.02□□□□□ -1.13
SSX3-203ENST00000376895 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
SSX3-203ENST00000376895 ZNF837Q96EG3 531 aaPredicted RBP8.02□□□□□ -1.13
SSX3-203ENST00000376895 ABHD17AQ96GS6 310 aa8.02□□□□□ -1.13
SSX3-203ENST00000376895 CNTNAP3BQ96NU0 1288 aa8.02□□□□□ -1.13
SSX3-203ENST00000376895 CNTNAP3Q9BZ76 1288 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms