RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DYDC1Q8WWB3 177 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTCH1-203ENST00000375274 GOLGA1Q92805 767 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
PTCH1-203ENST00000375274 DTNBO60941 627 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 ERO1AQ96HE7 468 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 MYL5Q02045 173 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 PKP1Q13835 747 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 MICALCLQ6ZW33 695 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 CEP112Q8N8E3 955 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 CLSTN2Q9H4D0 955 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 CBX8Q9HC52 389 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.36e-10■■■■■ 141.3
PTCH1-203ENST00000375274 MAGI2Q86UL8 1455 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 RNF187Q5TA31 235 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 DHX58Q96C10 678 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 NUTM2BA6NNL0 878 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 NUTM2EB1AL46 878 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 NUTM2AQ8IVF1 878 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
PTCH1-203ENST00000375274 FAM227BQ96M60 508 aa13.18□□□□□ -0.3
PTCH1-203ENST00000375274 FSD2A1L4K1 749 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 CTAGE9A4FU28 777 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 TMCO5BA8MYB1 307 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
PTCH1-203ENST00000375274 MAGI3Q5TCQ9 1506 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
PTCH1-203ENST00000375274 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 ZNF75DP51815 510 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 KARSQ15046 597 aaKnown RBP13.17□□□□□ -0.3
PTCH1-203ENST00000375274 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 PSMA7O14818 248 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 MYO1BO43795 1136 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 TCERG1LQ5VWI1 586 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 LZTFL1Q9NQ48 299 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 STX8Q9UNK0 236 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 SLC4A4Q9Y6R1 1079 aa13.17□□□□□ -0.3
PTCH1-203ENST00000375274 ANKRD62A6NC57 917 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 ZNF500O60304 480 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-203ENST00000375274 HOXC9P31274 260 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
PTCH1-203ENST00000375274 STX17P56962 302 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 ANTXR1Q9H6X2 564 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 EDC4Q6P2E9 1401 aaKnown RBP13.16□□□□□ -0.3
PTCH1-203ENST00000375274 HOXB7P09629 217 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 STAT6P42226 847 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 IFIT1BQ5T764 474 aaKnown RBP13.16□□□□□ -0.3
PTCH1-203ENST00000375274 ZFP91Q96JP5 570 aaPredicted RBP13.16□□□□□ -0.3
PTCH1-203ENST00000375274 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 CYP7A1P22680 504 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 USP19O94966 1318 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 MAST1Q9Y2H9 1570 aa13.16□□□□□ -0.3
PTCH1-203ENST00000375274 CAPN2P17655 700 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 PIP4K2BP78356 416 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 LLPHQ9BRT6 129 aaKnown RBP13.15□□□□□ -0.3
PTCH1-203ENST00000375274 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 IVLP07476 585 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 CETN2P41208 172 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 SSR1P43307 286 aaKnown RBP13.15□□□□□ -0.3
PTCH1-203ENST00000375274 TUBB4BP68371 445 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-203ENST00000375274 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 U2AF2P26368 475 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTCH1-203ENST00000375274 TIMM10P62072 90 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 MAATS1Q7Z4T9 603 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 SBNO2Q9Y2G9 1366 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 ZPR1O75312 459 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 RXRAP19793 462 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 CDC37L1Q7L3B6 337 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 CRACR2BQ8N4Y2 399 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-203ENST00000375274 GOPCQ9HD26 462 aa13.15□□□□□ -0.3
PTCH1-203ENST00000375274 IQSEC3Q9UPP2 1182 aaPredicted RBP13.15□□□□□ -0.3
PTCH1-203ENST00000375274 ANKRD18AQ8IVF6 992 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 KRI1Q8N9T8 703 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 DBNDD2Q9BQY9 259 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 ELP1O95163 1332 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 EXOC5O00471 708 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 KRT86O43790 486 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 LDHCP07864 332 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
PTCH1-203ENST00000375274 HELLSQ9NRZ9 838 aa13.14□□□□□ -0.31
PTCH1-203ENST00000375274 RSPH14Q9UHP6 348 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms