RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 YBX3P16989 372 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGCL-202ENST00000374487 TCIRG1Q13488 830 aa14.44□□□□□ -0.1
HMGCL-202ENST00000374487 HAUS7Q99871 368 aa14.44□□□□□ -0.1
HMGCL-202ENST00000374487 SH2B1Q9NRF2 756 aaPredicted RBP14.44□□□□□ -0.1
HMGCL-202ENST00000374487 NIP7Q9Y221 180 aaKnown RBP eCLIP14.44□□□□□ -0.1
HMGCL-202ENST00000374487 CD2APQ9Y5K6 639 aa14.44□□□□□ -0.1
HMGCL-202ENST00000374487 DPEP1P16444 411 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 FOXD4L6Q3SYB3 417 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-202ENST00000374487 FOXD4L3Q6VB84 417 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-202ENST00000374487 ATG9AQ7Z3C6 839 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 ZNF589Q86UQ0 364 aaPredicted RBP14.43□□□□□ -0.1
HMGCL-202ENST00000374487 SETDB2Q96T68 719 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 EYA2O00167 538 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 TIMM10P62072 90 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 CCDC57Q2TAC2 916 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 ZSCAN23Q3MJ62 389 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
HMGCL-202ENST00000374487 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 GPR108Q9NPR9 543 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 MED23Q9ULK4 1368 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 BCORQ6W2J9 1755 aa14.43□□□□□ -0.1
HMGCL-202ENST00000374487 C10orf71Q711Q0 1435 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 UBN2Q6ZU65 1347 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 TAF5LO75529 589 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 MBD3O95983 291 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 PRR5LQ6MZQ0 368 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 BLOC1S2Q6QNY1 142 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 CCDC83Q8IWF9 413 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 ZNF594Q96JF6 807 aaPredicted RBP14.42□□□□□ -0.1
HMGCL-202ENST00000374487 ISCA1Q9BUE6 129 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 HMG20BQ9P0W2 317 aa14.42□□□□□ -0.1
HMGCL-202ENST00000374487 KCNA3P22001 575 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 STX6O43752 255 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 CIAO1O76071 339 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 LARGE1O95461 756 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 ZNF445P59923 1031 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 ANKRD1Q15327 319 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 MCMDC2Q4G0Z9 681 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 LRRC24Q50LG9 513 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 SYNE4Q8N205 404 aa14.41□□□□□ -0.1
HMGCL-202ENST00000374487 GOLIM4O00461 696 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 ZSCAN22P10073 491 aaPredicted RBP14.4□□□□□ -0.1
HMGCL-202ENST00000374487 SYT1P21579 422 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
HMGCL-202ENST00000374487 GPR162Q16538 588 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 CLEC4GQ6UXB4 293 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 FAM43AQ8N2R8 423 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 KBTBD3Q8NAB2 608 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 CEP126Q9P2H0 1117 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 RFX7Q2KHR2 1363 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 ERVV-1B6SEH8 477 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 GJB2P29033 226 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 KRT32Q14532 448 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 TAF7LQ5H9L4 462 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 SUSD4Q5VX71 490 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 GIGYF2Q6Y7W6 1299 aaKnown RBP14.4□□□□□ -0.1
HMGCL-202ENST00000374487 ANP32BQ92688 251 aaKnown RBP14.4□□□□□ -0.1
HMGCL-202ENST00000374487 FAM89AQ96GI7 184 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 PAG1Q9NWQ8 432 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 RBM27Q9P2N5 1060 aaKnown RBP14.4□□□□□ -0.1
HMGCL-202ENST00000374487 ATP6V1DQ9Y5K8 247 aa14.4□□□□□ -0.1
HMGCL-202ENST00000374487 RPAP1Q9BWH6 1393 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 A0A1B0GUL7 405 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 ME3Q16798 604 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 KIAA1551Q9HCM1 1747 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 PCCAP05165 728 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 IFIT1P09914 478 aaKnown RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 RPS6KB1P23443 525 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 GORABQ5T7V8 394 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 ZNF34Q8IZ26 560 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 ZBTB38Q8NAP3 1195 aaPredicted RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 SEC62Q99442 399 aaKnown RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 PUS3Q9BZE2 481 aaKnown RBP14.39□□□□□ -0.11
HMGCL-202ENST00000374487 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
HMGCL-202ENST00000374487 NPHP1O15259 732 aa14.38□□□□□ -0.11
HMGCL-202ENST00000374487 IFIT5Q13325 482 aaKnown RBP14.38□□□□□ -0.11
HMGCL-202ENST00000374487 CCDC129Q6ZRS4 1044 aa14.38□□□□□ -0.11
HMGCL-202ENST00000374487 NECAB1Q8N987 351 aa14.38□□□□□ -0.11
HMGCL-202ENST00000374487 CNBD1Q8NA66 436 aa14.38□□□□□ -0.11
HMGCL-202ENST00000374487 CCDC85AQ96PX6 553 aaPredicted RBP14.38□□□□□ -0.11
HMGCL-202ENST00000374487 GDPD2Q9HCC8 539 aa14.38□□□□□ -0.11
HMGCL-202ENST00000374487 NUP98P52948 1817 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 CHGBP05060 677 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 ERFEQ4G0M1 354 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 TCEANC2Q96MN5 208 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 TMEM63CQ9P1W3 806 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 NSFL1CQ9UNZ2 370 aaKnown RBP14.37□□□□□ -0.11
HMGCL-202ENST00000374487 AKAP2Q9Y2D5 859 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 TAF6LQ9Y6J9 622 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 NRXN2Q9P2S2 1712 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 ZNF609O15014 1411 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 HSP90AB3PQ58FF7 597 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 CCDC158Q5M9N0 1113 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 C3orf67Q6ZVT6 689 aa14.37□□□□□ -0.11
HMGCL-202ENST00000374487 USP48Q86UV5 1035 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms