RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 HSPD1P10809 573 aaKnown RBP28.25■■■□□ 2.11
SNX21-204ENST00000372542 FGFR2P21802 821 aa28.25■■■□□ 2.11
SNX21-204ENST00000372542 FAM177BA6PVY3 158 aa28.25■■■□□ 2.11
SNX21-204ENST00000372542 ARID4AP29374 1257 aaPredicted RBP28.25■■■□□ 2.11
SNX21-204ENST00000372542 APPBP2Q92624 585 aa28.25■■■□□ 2.11
SNX21-204ENST00000372542 SCN7AQ01118 1682 aa28.24■■■□□ 2.11
SNX21-204ENST00000372542 SLC5A1P13866 664 aa28.24■■■□□ 2.11
SNX21-204ENST00000372542 IGHMBP2P38935 993 aaKnown RBP28.23■■■□□ 2.11
SNX21-204ENST00000372542 MCAMP43121 646 aa28.23■■■□□ 2.11
SNX21-204ENST00000372542 TOB2Q14106 344 aaPredicted RBP28.23■■■□□ 2.11
SNX21-204ENST00000372542 OSBP2Q969R2 916 aa28.23■■■□□ 2.11
SNX21-204ENST00000372542 M0R2C6 588 aa28.22■■■□□ 2.11
SNX21-204ENST00000372542 STX6O43752 255 aa28.22■■■□□ 2.11
SNX21-204ENST00000372542 FOXD4L5Q5VV16 416 aaPredicted RBP28.22■■■□□ 2.11
SNX21-204ENST00000372542 FOXD4L4Q8WXT5 416 aaPredicted RBP28.22■■■□□ 2.11
SNX21-204ENST00000372542 CTNNA3Q9UI47 895 aa28.22■■■□□ 2.11
SNX21-204ENST00000372542 PRPF40AO75400 957 aaKnown RBP28.22■■■□□ 2.11
SNX21-204ENST00000372542 ZSCAN22P10073 491 aaPredicted RBP28.22■■■□□ 2.11
SNX21-204ENST00000372542 WASHC4Q2M389 1173 aa28.22■■■□□ 2.11
SNX21-204ENST00000372542 SLFNL1Q499Z3 407 aa28.22■■■□□ 2.11
SNX21-204ENST00000372542 CCDC102BQ68D86 513 aa28.22■■■□□ 2.11
SNX21-204ENST00000372542 SYT1P21579 422 aa28.21■■■□□ 2.11
SNX21-204ENST00000372542 GJB2P29033 226 aa28.21■■■□□ 2.11
SNX21-204ENST00000372542 ST3GAL1Q11201 340 aa28.2■■■□□ 2.11
SNX21-204ENST00000372542 ATP6V1DQ9Y5K8 247 aa28.2■■■□□ 2.1
SNX21-204ENST00000372542 LAMA4Q16363 1823 aa28.19■■■□□ 2.1
SNX21-204ENST00000372542 RPS6KA4O75676 772 aa28.19■■■□□ 2.1
SNX21-204ENST00000372542 MEX3CQ5U5Q3 659 aaKnown RBP28.19■■■□□ 2.1
SNX21-204ENST00000372542 CDC5LQ99459 802 aaKnown RBP28.19■■■□□ 2.1
SNX21-204ENST00000372542 SEC31BQ9NQW1 1179 aa28.19■■■□□ 2.1
SNX21-204ENST00000372542 ATRNO75882 1429 aa28.19■■■□□ 2.1
SNX21-204ENST00000372542 DHX32Q7L7V1 743 aaKnown RBP28.18■■■□□ 2.1
SNX21-204ENST00000372542 MBD3O95983 291 aa28.18■■■□□ 2.1
SNX21-204ENST00000372542 PHKA1P46020 1223 aa28.18■■■□□ 2.1
SNX21-204ENST00000372542 COL9A3Q14050 684 aaPredicted RBP28.18■■■□□ 2.1
SNX21-204ENST00000372542 NECAB1Q8N987 351 aa28.18■■■□□ 2.1
SNX21-204ENST00000372542 GJD4Q96KN9 370 aaPredicted RBP28.18■■■□□ 2.1
SNX21-204ENST00000372542 TCEANC2Q96MN5 208 aa28.18■■■□□ 2.1
SNX21-204ENST00000372542 ADD2P35612 726 aa28.17■■■□□ 2.1
SNX21-204ENST00000372542 MRE11P49959 708 aa28.17■■■□□ 2.1
SNX21-204ENST00000372542 PI16Q6UXB8 463 aa28.17■■■□□ 2.1
SNX21-204ENST00000372542 STOX1Q6ZVD7 989 aa28.17■■■□□ 2.1
SNX21-204ENST00000372542 NARFQ9UHQ1 456 aa28.17■■■□□ 2.1
SNX21-204ENST00000372542 PDCP20941 246 aa28.16■■■□□ 2.1
SNX21-204ENST00000372542 UBE3CQ15386 1083 aa28.16■■■□□ 2.1
SNX21-204ENST00000372542 SF3B3Q15393 1217 aaKnown RBP28.16■■■□□ 2.1
SNX21-204ENST00000372542 Q6ZUG5 572 aa28.16■■■□□ 2.1
SNX21-204ENST00000372542 HELBQ8NG08 1087 aaPredicted RBP28.16■■■□□ 2.1
SNX21-204ENST00000372542 CERKQ8TCT0 537 aa28.16■■■□□ 2.1
SNX21-204ENST00000372542 LY75O60449 1722 aa28.15■■■□□ 2.1
SNX21-204ENST00000372542 F13A1P00488 732 aa28.15■■■□□ 2.1
SNX21-204ENST00000372542 E7EWF7 191 aa28.14■■■□□ 2.1
SNX21-204ENST00000372542 PTF1AQ7RTS3 328 aa28.14■■■□□ 2.1
SNX21-204ENST00000372542 NYXQ9GZU5 481 aa28.14■■■□□ 2.1
SNX21-204ENST00000372542 CCNL1Q9UK58 526 aaPredicted RBP28.14■■■□□ 2.1
SNX21-204ENST00000372542 IMMTQ16891 758 aaKnown RBP28.13■■■□□ 2.09
SNX21-204ENST00000372542 SLC10A5Q5PT55 438 aa28.13■■■□□ 2.09
SNX21-204ENST00000372542 PUS7LQ9H0K6 701 aaKnown RBP28.13■■■□□ 2.09
SNX21-204ENST00000372542 NCLP19338 710 aaKnown RBP28.13■■■□□ 2.09
SNX21-204ENST00000372542 EXOSC10Q01780 885 aaKnown RBP28.13■■■□□ 2.09
SNX21-204ENST00000372542 ERFEQ4G0M1 354 aa28.13■■■□□ 2.09
SNX21-204ENST00000372542 SLC9C2Q5TAH2 1124 aa28.13■■■□□ 2.09
SNX21-204ENST00000372542 TMEM87AQ8NBN3 555 aa28.13■■■□□ 2.09
SNX21-204ENST00000372542 GTF3C6Q969F1 213 aa28.13■■■□□ 2.09
SNX21-204ENST00000372542 PIH1D3Q9NQM4 214 aaKnown RBP28.13■■■□□ 2.09
SNX21-204ENST00000372542 MTMR6Q9Y217 621 aa28.13■■■□□ 2.09
SNX21-204ENST00000372542 SBF2Q86WG5 1849 aa28.12■■■□□ 2.09
SNX21-204ENST00000372542 COL24A1Q17RW2 1714 aa28.12■■■□□ 2.09
SNX21-204ENST00000372542 GPAA1O43292 621 aa28.12■■■□□ 2.09
SNX21-204ENST00000372542 ONECUT3O60422 494 aaPredicted RBP28.12■■■□□ 2.09
SNX21-204ENST00000372542 FGD1P98174 961 aa28.12■■■□□ 2.09
SNX21-204ENST00000372542 SPATA5Q8NB90 893 aa28.12■■■□□ 2.09
SNX21-204ENST00000372542 AGXT2Q9BYV1 514 aa28.12■■■□□ 2.09
SNX21-204ENST00000372542 AFF2P51816 1311 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 DOCK2Q92608 1830 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 KCNQ4P56696 695 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 ANKRD18AQ8IVF6 992 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 GPT2Q8TD30 523 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 BCL2L12Q9HB09 334 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 TAF1LQ8IZX4 1826 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 CHRNDQ07001 517 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 CHAMP1Q96JM3 812 aa28.11■■■□□ 2.09
SNX21-204ENST00000372542 RTCBQ9Y3I0 505 aaKnown RBP28.11■■■□□ 2.09
SNX21-204ENST00000372542 CASZ1Q86V15 1759 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 FOXP2O15409 715 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 ZPR1O75312 459 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 IDH1O75874 414 aaKnown RBP28.1■■■□□ 2.09
SNX21-204ENST00000372542 ZNF445P59923 1031 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 TBC1D9BQ66K14 1250 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 CAVIN1Q6NZI2 390 aaKnown RBP28.1■■■□□ 2.09
SNX21-204ENST00000372542 FBXL16Q8N461 479 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 CHMP4CQ96CF2 233 aa28.1■■■□□ 2.09
SNX21-204ENST00000372542 GNPATO15228 680 aa28.09■■■□□ 2.09
SNX21-204ENST00000372542 LARP1BQ659C4 914 aaKnown RBP28.09■■■□□ 2.09
SNX21-204ENST00000372542 BRF1Q92994 677 aa28.09■■■□□ 2.09
SNX21-204ENST00000372542 GRPEL1Q9HAV7 217 aa28.09■■■□□ 2.09
SNX21-204ENST00000372542 TRPC5Q9UL62 973 aaPredicted RBP28.09■■■□□ 2.09
SNX21-204ENST00000372542 FGAP02671 866 aa28.08■■■□□ 2.09
SNX21-204ENST00000372542 XRCC6P12956 609 aaKnown RBP eCLIP28.08■■■□□ 2.09
SNX21-204ENST00000372542 PDE6AP16499 860 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms